Sphingomonas echinoides: B18_21255
Help
Entry
B18_21255 CDS
T06681
Name
(GenBank) large repetitive protein
KO
K20276
large repetitive protein
Organism
sech
Sphingomonas echinoides
Pathway
sech02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B18_21255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
bMG3
SdrD_B
CarboxypepD_reg
Big_10
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QLD76506
LinkDB
All DBs
Position
4575018..4581170
Genome browser
AA seq
2050 aa
AA seq
DB search
MSIQAKVTPIDQSISSAAAVEVPENGILKLSQSSNIALDVAPESVAGYSKSGSDLIVQLK
TGESVRIANFYAEGQPSSQLFLADKDKLVAVDLPPVAADGPLMAGYIPQESLAGFESLTG
AGVLGGMSAGTALLVGAAAIGAGVAISNSSGGGGGGGSSVPPDTTPPKAASGLKIAPDGS
SISGQAEAGASVGIDTNGDGKPDLTVIADANGNFTAPLNPPLTNGETVTVIVTDPAGNSS
TPVTAEAPDFPDAPQVNASNGSVLSGTAEAGVTIVITDGNGNPIGQTSADANGNWSFTPG
SQLPDGTVVNVVARDAAGNSSPATSITVDGVAPNAPVVEPSNGSELSGTAEPGSSVTLTD
GNGNPIGQTTADANGNWSFTPSTPLPDGTVVNVVARDAAGNSSPPASVTVDAVAPATPTV
DPSNGTTLSGTAEPGSSVTLTDGNGNPIGQVTADGSGNWTYTPSTPIANGTVVNVVAQDA
AGNSSPGASVTVDSQAPAAPVLNPSNGTTLSGTAEPGATVTLTDGNGNPIGQVTADGSGN
WSFTPGTPLANGTVVNATASDPTGNTSAPASTTVDSVAPAAPVVNPSNGAEISGTAEPGA
TVTLTDGSGNPIGQVTADGSGNWSFTPSTPLADGTVVNATATDPAGNTGGQGSTTVDAIA
PATPTVNLSNGSSLSGTAEPGSTVILTDGNGNPIAEVTADGSGNWTYTPSTPIANGTVVN
VVAEDAAGNSSPPATVTVDSSAPPAPVINPSNGVVISGTAEAGATVTLTDAGGNPIGQVT
ADGSGNWSFTPGTPLANGTVIVATATDPTGNTGPQAATTVDSVAPAAPVVNPSNGTTISG
TAEAGAKVILTDGSGNPIGETTADGSGNWTFTPGTPLANGTVVNAVAQDPAGNTGPQGST
TVDAVAPNTPVVNPSNGNLLNGTAEPGSTVTLTDGNGNPIGQTTADGSGNWSFTPGSQLP
NGTVVNVTASDAAGNTSPPATTTVDSSLPSIPQVDPSNGSVISGTADAGNTIIITDGNGN
PIGQVTADGSGNWSFTPGIPLPDGTVVNVVARSPSNVDSAPAVITVDGVAPAAPVIDPSN
GSVIAGTAEAGATVILTDGGGNPIGQATADGSGNWTFTPSTPLANGTVINAVAQDPAGNT
SGPASVTVDAIAPPAPVINPSNGVVISGTAEAGATVILTDGNGNPIGQVTADGSGNWSFT
PGTPLANGSVINALAQDAAGNTSGPASTTVDSVAPATPVLDPSNGTVISGTAEAGATVIL
TDGGGNPIGQATADGSGNWSFTPGTPLTNGTVINAVAQDAAGNTSGPVSTTVDAVAPATP
VIDPSNGVELSGTAEPGVRVILTDGNGNPIGQTLADGSGNWTFTPGTPLANGTVVNAVAQ
DPAGNTSGPASTTVDTVAPATPVINASNGSVITGTAEVGAKVILTDGNGNPIGETTADGS
GNWTFTPGTPLANGTVINAVAEDAAGNASGPASTTVDSVAPSAPLLSISADGALLTGTAE
PNSQVRIVVNGDTANPITVTVDGAGNFSLPFAPPLITGELIAGVAVDAAGNVSGPATINA
PDLAPPTISVPEAADTWINAAEIGDGIQVDVTVRPTMQVGQVVTVKFAGQNGYEAEVSHT
LTAGDIAAGNLTLTLTPPGGMGPFPEGASTVTADINGGTASTPVPFTIDTIPPATPVLSL
VGNILTISAEPGTELTVTVDVGGVTATATVTADNSGLASLNLLTDLDIDFSWDQLLNAQV
SVVGRDPAGNPSNTASIGVGTSIEQPVTIGNFGLDVSLNPLNPRFGFSGTTEPDSSVVIR
VITPALNVELLPIQADSSGNFSLNLLSPTILTQLGLNITDILNLGSQISFNLVSTDSNGN
DSAAYGITLTPNGLSLNIGQIDVNGTSGDDVLSGANGSSEHINGGDGSDLIFNVGTGDHV
VAGNGNDTIQITATDFVSIDGGAGFDTLVLANGIDLDYNAVGVGTLSNLERIDLGKGDSG
SVLTLTAAEVDAITDANNTLQITGENNDTLNVVGAVNTGTTQLINGITYDVYTFGSTTLL
IEDNTVQVVV
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccaggcgaaagttacccctatcgatcagagtatttcttctgcggctgccgtc
gaggttccggaaaacgggatactcaaactctcccagagcagtaatatcgcgctcgatgtc
gcaccggagtcggtggcgggatactcgaagagcggttcggacctgatcgtccagctgaag
accggggaaagcgtacgcatcgccaacttctatgcggaaggccagccttccagccagctg
ttcctggccgacaaggacaagctggtggcggtagatctgccgccggtcgccgccgacggg
ccgctgatggccggctacatcccgcaggaaagcctggccggtttcgagtcgctgaccggc
gccggtgtgctcggtggcatgagcgcagggactgcgctgctggtcggtgcggcggccatc
ggcgccggggtggctatttccaacagcagcggcggcggtggcggcggcggttcttcggtg
cccccggacaccactccgccgaaggcggccagcggcctgaagatagcgcctgacggcagc
agcatcagcggccaggccgaggccggcgcgagcgtcggcatcgataccaatggcgacggc
aagccggacctcaccgtgatcgccgatgccaacggcaatttcaccgctccgctgaacccg
ccgctgaccaatggcgagacggtgacggtgatcgttaccgacccggccggcaacagcagc
accccggtcaccgccgaagcccccgacttccccgacgcgccccaggtcaatgccagcaac
ggcagcgtcctcagcggtacggcggaagcgggcgtgaccatcgtgatcaccgacggcaac
ggcaatccgatcggccagaccagcgccgatgccaacggcaactggagcttcacccccggt
agccaactgccggatggcaccgtggtcaatgtggtggccagggacgccgccggcaacagc
agcccggcgacctccatcaccgtcgacggcgtggcgccgaacgcgccggtggtcgagccg
agcaacggcagcgaactcagcgggactgccgaaccgggcagcagcgtgaccctgaccgac
ggcaatggcaatccgatcggccagaccaccgccgatgccaacggcaactggtctttcacg
ccgtccaccccgttgccggacggtaccgtggtcaacgtggtggccagggatgccgccggc
aacagcagtccgccggccagcgttaccgtggatgccgtcgcgccggccacgcccaccgtc
gatccgagcaacggtacgaccctcagcggcaccgccgagccgggcagtagcgtgaccctg
accgacggcaacggtaacccgatagggcaggtcaccgccgacggcagcggcaactggacc
tacaccccgtccacgccgatcgccaacggcaccgtggtcaacgtggtggcccaggacgcc
gccggcaatagcagcccgggcgccagcgtcaccgtggactcgcaggccccggcggctccg
gtgctcaacccgagcaacggcaccacgctcagcggcaccgccgagccgggcgctaccgtg
accctgaccgacggcaacggcaacccgattggccaggtcaccgccgacggcagcggcaac
tggagcttcacaccgggcacgccgctggccaacggcaccgtggtcaacgccacggccagc
gacccgaccggcaataccagcgctccggccagcaccaccgtggactcggtggcgccggcc
gcgccggtggtcaatccgagcaacggcgcggagatcagcggcaccgccgaaccgggcgcc
accgtgaccctgaccgatggcagcggcaatccgatcgggcaggtcactgccgacggcagc
ggcaactggagcttcaccccgtccacgccgctggcggatggaaccgtggtcaacgccacc
gctaccgacccggccggcaataccggcggccagggcagcaccaccgtggacgccatcgcg
ccggccacgccgaccgtcaacctgagcaatggcagcagcctcagcggcaccgccgagccg
ggcagcacggtgattctcaccgacggcaacggcaatccgatcgccgaggttaccgccgac
ggcagcggcaactggacctacaccccgtccacgccgatcgccaacggtactgtggtcaac
gtggtggccgaggacgccgccggtaacagcagcccgccggcgacggtgaccgtcgattcc
agcgcgccgccggcgccggtgatcaacccgagcaacggcgtcgtcatcagcggtaccgcc
gaggccggtgccaccgtgaccctcaccgatgccggcggcaacccgatcgggcaggtcacc
gccgacggcagcggcaactggagcttcacgccgggcacgccgctggccaacggcacggtg
atcgtcgccacggccaccgacccgaccggcaataccggcccgcaggccgccaccacggtg
gactcggtggcgccggccgcgccggtggtcaatccgagcaacggcacgaccatcagcggc
accgcggaggccggggccaaggtgattctcaccgatggcagcggcaacccgatcggcgaa
accaccgccgacggcagcggcaactggaccttcaccccgggcaccccgttggccaacggc
acggtggtcaacgccgtggcccaggaccctgcgggcaataccggcccgcagggcagcact
accgtggacgcggtggcgccgaacacgcctgtggtcaatccgagcaacggcaacctgctc
aacggcaccgccgagccgggtagcaccgtgaccttgaccgacggcaacggcaacccgatc
ggccagaccaccgccgatggcagcggcaactggagcttcacgcccggctcgcaactgccc
aacggcaccgtggtcaacgtgaccgcgagcgacgccgccggcaataccagccctcccgct
accacgacggtggattcctcactgccgtcgatcccgcaggtggatccgagcaacggttcg
gtgatcagcggcaccgccgacgccggcaacaccatcatcatcaccgatggcaacggcaac
ccgattggccaggtcaccgccgacggcagcggcaactggtccttcactccaggcatcccg
ctgccggatggcacggtggtcaacgtggtggcgcgcagcccaagcaatgtcgacagtgcg
ccggcggtgatcacggtggatggcgtggccccggcggcgccggtgatcgatccgagcaac
ggcagcgtgatcgccggtaccgcggaagccggtgcgacggtgatcctcaccgatggcggc
ggcaacccgatcggccaggccaccgccgacggcagcggcaactggacgttcaccccgagc
accccgctggccaacggcaccgtgatcaacgccgtggcccaggacccggccggcaatacc
agcggtccggccagcgtcaccgtcgatgccatcgccccgccggcgccggtgatcaatccg
agcaatggagtcgtcatcagcggtacggcggaagccggggccacggtgatcctcaccgac
ggcaacggcaacccgatcggccaggtcaccgccgacggcagcggcaactggagcttcacg
cccggcacgccgctggccaatggttcggtgatcaatgcgctggcccaggacgccgccggc
aacaccagcggcccggccagcaccacggtggactcggtagccccggccaccccggtgctc
gatccgagcaacggtacggtgatcagcggtaccgccgaagccggggccacggtgatcctc
accgacggcggcggcaacccgatagggcaggccaccgccgatggcagcggcaactggagc
ttcaccccgggcacaccgctgaccaacggcacggtgatcaatgcggtggcccaggacgcc
gccggcaacaccagcggtccggtcagcaccacggtggacgcggtggccccggccaccccg
gtgatcgacccgagcaatggtgtcgaactcagcggcaccgccgaacccggcgtccgggtg
atcctcaccgatggcaatggcaacccgatcggccagaccctcgccgacggtagcggcaac
tggaccttcacaccgggcacgccgctggccaacggcacggtggtcaacgccgtggcccag
gacccggccggcaataccagcggtccggccagcaccacggtggatacggtggcgccggcc
acgccggtgatcaatgccagcaacggcagcgtgatcaccggcaccgccgaggtcggcgcc
aaagtgatcctcaccgacggcaacggcaacccgatcggcgagaccaccgccgacggcagt
ggcaactggaccttcacccccggcacgccgctggccaacggtacggtgatcaacgccgtc
gccgaagacgccgcgggcaacgccagcggtccggccagcaccacggtggactcggtggcg
ccgtccgctccgctgctgagcatcagcgccgacggcgcgctgctgaccggcaccgccgag
ccgaacagtcaggtgcgtatcgtggtcaacggcgacaccgccaacccgatcacggtcacc
gtcgacggcgccggcaacttcagcctgccgttcgcgccgccgctgatcaccggcgaactg
atcgccggggttgccgtggacgccgccggcaacgtcagcgggccggccaccatcaacgcg
ccggacctggcgccgccgaccatcagcgtgccggaagccgccgatacctggatcaacgcc
gcggagatcggcgacggcatccaggtcgatgtgacggtccgtccgaccatgcaggtcggc
caggtggtcacggtcaagttcgccgggcagaacggctacgaggccgaggtcagccatacc
ctcaccgccggcgacatcgccgccggcaacctgaccctgaccctgacgcctcccggcggc
atgggcccgttcccggagggcgcctcgaccgtcaccgccgacatcaacggcggcaccgcg
tcgaccccggtgccgttcaccatcgacaccattccgccggcgaccccggtgctgtccctg
gtcggcaacatcctgaccatctcggcggagccggggaccgagctgacggtgaccgtcgac
gtcggcggggtgaccgccaccgccacggtgaccgccgacaacagcgggctggcgtcgctg
aacctgctcaccgacctggacatcgacttcagttgggaccagttgctcaatgcccaggtg
tcggtggtcgggcgcgacccggccggcaacccgagcaacacggcgagcatcggcgtcggc
accagcatcgagcaaccggtgaccatcggcaacttcggcctcgacgtcagcctcaacccg
ctgaacccgcgtttcggtttcagcggaaccaccgagcctgactccagcgtggtgatccgg
gtcatcaccccggcgttgaacgtcgaattgctgccgatccaggcggattcgtccggaaac
ttctcgctgaacctgctgagcccgaccatcctcacccagttggggctgaacatcaccgac
atcctcaacctcggctcgcagatctcgttcaacctggtgtccaccgactccaatggcaac
gacagcgccgcctacgggatcaccctgacccccaacggactgtcgctcaatatcggccag
atcgatgtcaacggtacttccggcgacgacgtgctgtccggcgccaacggcagttcggag
cacatcaacggcggcgacggcagcgacctgatcttcaacgtgggcaccggcgatcacgtg
gtggccggcaacggcaacgacaccatccagatcaccgcgaccgatttcgtcagcatcgat
ggcggcgccgggttcgacaccctggtcctggccaacggcatcgacctcgactacaacgcc
gtcggcgtcggcacgctcagcaacctcgagcgcatcgacctcggcaagggcgattcgggt
agcgtgctgaccctgaccgcggcggaggtggatgccatcaccgatgccaacaacacgttg
cagatcaccggcgagaacaacgacaccctgaacgtggtgggcgcggtgaataccggtacc
acgcaactgatcaacggcattacctacgacgtctacaccttcggcagtaccaccctgctg
atcgaggacaacacggtacaggtcgtggtctga
DBGET
integrated database retrieval system
