Salmonella enterica subsp. enterica serovar Dublin: SeD_A2434
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Entry
SeD_A2434 CDS
T00757
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Pathway
sed00521
Streptomycin biosynthesis
sed00523
Polyketide sugar unit biosynthesis
sed00541
O-Antigen nucleotide sugar biosynthesis
sed01100
Metabolic pathways
sed01110
Biosynthesis of secondary metabolites
sed01250
Biosynthesis of nucleotide sugars
Module
sed_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SeD_A2434 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SeD_A2434 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SeD_A2434 (rfbC)
Enzymes [BR:
sed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SeD_A2434 (rfbC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACH77908
UniProt:
A0A6C7A3V8
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All DBs
Position
complement(2306771..2307319)
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AA seq
182 aa
AA seq
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MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRG
LHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHG
FVTLSEYAEFLYKATNYYSPSSEGSILWNDETIGIEWPFSQLPELSAKDAAAPLLHQALL
TE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgattaaaacagcaataccagatgtcttgatcttagagcctaaagtttttggc
gatgagaggggattcttttttgaaagttataaccagcagacctttgaagagttgattgga
cgtaaagttacatttgttcaagataatcattcaaaatccaaaaagaacgtactcagaggg
ctacattttcagagaggagaaaatgcacaggggaagttagttcgttgtgctgtcggtgag
gtttttgatgttgcggtcgatatccgaaaagaatcgcctacttttggtcaatgggttggc
gtaaatctatctgctgagaataagcgacagctttggattccagaaggttttgctcatggt
tttgttactcttagtgagtatgcagagtttctgtacaaagcaactaattattactcacct
tcatcggaaggtagcattttatggaatgatgagacaataggtattgaatggcctttttct
cagctgcctgagctttcagcaaaagatgctgcagcacctttactgcatcaagccttgtta
acagagtaa
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