Parasedimentitalea marina: EBB79_22055
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Entry
EBB79_22055 CDS
T05780
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sedi
Parasedimentitalea marina
Pathway
sedi00521
Streptomycin biosynthesis
sedi00523
Polyketide sugar unit biosynthesis
sedi00541
O-Antigen nucleotide sugar biosynthesis
sedi01100
Metabolic pathways
sedi01110
Biosynthesis of secondary metabolites
sedi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EBB79_22055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EBB79_22055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EBB79_22055 (rfbC)
Enzymes [BR:
sedi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EBB79_22055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZV80646
UniProt:
A0A3T0N9E1
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All DBs
Position
pW43A:98993..99556
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AA seq
187 aa
AA seq
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MEITQTPLPGVLLLEPRRFGDARGFFSESWNRKNLEGHGITLDFVQDNHSMSAQVGTLRG
LHFQSPPHAQAKLVRCGRGRLFDVAVDIRKGSPTYGHWFGAELSFENGLQLLIPAGFLHG
FITREPDTEIIYKCTDYYAPDCDGAVAWDSCGIDWDFEGPPLLSEKDAVATALANFDSPF
TWDGEMA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtggaaattacacagacccccctgccaggcgttctattgctggaaccccgtcgttttggc
gatgcccgtggatttttcagtgaaagctggaaccggaaaaaccttgaaggtcatggcatc
actctggattttgtgcaggacaatcactcgatgtcggcgcaggtgggcaccctgcgtgga
ttgcatttccaatccccgccccacgcccaggcaaaactggtgcgctgcggtcgcggccgg
ctttttgatgtggcggttgatatccgcaaaggctcccccacctatgggcactggttcggc
gctgagctgagctttgagaacggcttacagctgctgatccccgcagggttcttacacggg
ttcattacccgcgagcctgatacagaaatcatctataaatgcaccgattactacgccccc
gactgcgatggcgcggtggcctgggacagttgcggtatcgactgggactttgaaggcccc
cccctactgagcgaaaaagatgcggtggccactgcgctggccaacttcgatagccccttc
acctgggacggagagatggcatga
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