Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_06155
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Entry
CFSAN002050_06155 CDS
T02734
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seec03000
]
CFSAN002050_06155
Transcription factors [BR:
seec03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFSAN002050_06155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_22
EIIA-man
SoFic-like_C
AAA_16
AAA_30
HTH_IclR
HTH_Crp_2
MarR_2
AAA_19
UPF0122
AAA_2
RuvB_N
MCM
Motif
Other DBs
NCBI-ProteinID:
AGQ71904
LinkDB
All DBs
Position
935497..938262
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AA seq
921 aa
AA seq
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MRKDALLAFLMNQTDFFDPENVSEVFTARYLAQRFNMQRNTASHYLNQLVAQGVLCKINT
RPVYFLHKQAFSQQFFTLSRNEYASVAELLAHGEQECAPDDHFSLLIGHNESLKRPIEQL
KTALFYPDGGLPLLMTGESGTGKSYLAQLMHEYAIAQALLSPDAPFISFNCAQYASNPEL
LAANLFGYVKGAFTGAQSDRPGAFEAADGGMLFLDEVHRLSAEGQEKLFTWLDRGEIYRV
GDTAQGHPVSVRLVFATTEEIHSTFLTTFLRRIPIQVNLPDLQHRSRQEKEALILLFFWT
EAKKLSATLILKPRLLQILNQYVYRGNVGELKNVVKYAVATAWAKKPGQETVTVSLHDLP
DAMLSALPSLNEPLADDTQVSISPDTNLTWLLRARDEMQGMIHDTQCHVLALYELVRSGK
EEWETVQKRMGDEIETLFDRLIFTGDDNVHSQRLLLITSQVREEFYRLEKRFNMQLNGNC
IYALSHYLIHRTALAPSRLNSEQIRQLDAFLAQKYPLLYSFCLQILETLGQKLDLEPRRI
DMLLLALWLHKQGANNQKQVTHAVILAHGYATASSIANVANRLLKNTIFESFDMPLDVTP
EAIAQQVMRYLEEHPLASGLMILVDMGSLKAIHRHFDRALSTPVTIINNVSTSMALYVGE
RILQGHFIEEIARDIARDVPVEYQLYWPKSNKPRAILTTCATGIGVATNLCALLSASIPQ
ALEIDVVACDYAMLVSNKTQEPVFMRYDVLAIVGTLDPHIASVPWISLDSLISGEGNHYL
MRLFGSLTTPEQVAEINNLLLKNFSLRRVIESVTILDTSKVINHVEQFLLRYEHLAGVTV
SNERKVALYVHISCLIERLIRHAGITAYSGQQCPEQELNRLREAFSVIESNYSVKIPTAE
LGYIHNILTFETELIEQDQQF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagatgccctgcttgctttcctgatgaaccaaacggatttttttgatccggaa
aatgtcagtgaggtgtttaccgcgcgctatctggcgcagcgttttaatatgcagcgcaat
accgccagccattatctgaaccaactggtggcgcagggcgtgctctgcaaaatcaatacc
cgtcccgtctatttcctgcataagcaggcatttagccaacagttttttaccctttcgcgt
aatgaatacgccagcgtcgcggagctgttagcgcacggggaacaggagtgcgcgccggac
gatcacttttctctgttgattggtcataacgaaagcctgaagcgcccgattgagcaactg
aaaaccgcgctgttttatcccgacggcggactgccgctactgatgaccggcgaaagcggc
accgggaaaagttatctggcgcagctcatgcacgaatatgccatcgcccaggcgcttctg
tcgccggatgcgccatttatcagttttaattgcgcccagtatgcgagcaatcccgaactg
ctggcggcgaatctttttggatatgtgaagggcgcgtttaccggcgcgcagagcgacaga
ccgggcgcgttcgaggcggctgacggcggcatgttatttctggatgaagtccaccggctg
agcgccgaagggcaggagaagctctttacctggctcgatcgtggtgaaatttatcgggta
ggcgacaccgcgcaggggcatccggtttcggtacgtctggtatttgcgacgaccgaagag
atacacagtacctttctgacgacatttttgcgacgcatcccgattcaggtcaacctgccg
gatctccagcaccgcagccgccaggaaaaagaggcgctgatcttactgtttttctggacg
gaggcgaaaaaactttcggccacgcttatcctcaaaccgcgtttgttgcagatcctcaat
cagtatgtttatcgcggcaacgtcggcgagctgaaaaatgtggtgaagtatgcggtggcg
acggcatgggcgaaaaagcctgggcaggaaaccgttaccgtgtcgctgcacgatctgccg
gatgccatgctgtcggcattgccgtcactgaatgaaccgctggcggacgacacgcaggtg
agcatctcgcccgacacgaaccttacctggctgctgcgcgcccgcgacgagatgcagggc
atgatccatgatacgcagtgtcatgtgctggcgctatacgaactggtacgtagcgggaaa
gaggagtgggagacggtacaaaaaagaatgggcgatgaaattgagaccctcttcgatcgc
ctgatttttaccggcgacgataatgtgcactcacagcggttgctgttaattacaagccag
gtgcgggaagagttttatcgtctggagaagcgtttcaatatgcagcttaacggtaactgt
atttacgcgcttagccactatttaatccatcgtaccgcactggcgccttctcgtctcaac
agcgagcagatccgccaactggacgccttcctcgcccagaaatatccgctgctgtacagc
ttctgtttacaaattctggagacgctgggccagaagctggatctggagccgagacgcatt
gatatgctgctgctggcgctttggctgcataaacagggggctaacaatcaaaaacaggtg
acgcatgcggtgattctggcgcacggctatgccaccgccagcagtatcgccaacgtcgcc
aaccggctactgaaaaatacgatttttgaatcgttcgatatgccgctggacgtcacgccg
gaggcgatagcgcaacaggtgatgcgctatctggaagagcatccgctcgcctccggcctg
atgattctggtggatatgggatcgctcaaggccattcatcgtcattttgatcgcgcgctt
tccacgccggtgacgattatcaacaacgtctcgaccagcatggccctgtatgtaggggag
cgtattttacaggggcattttattgaagagatcgcccgcgatatcgcccgggatgtgccg
gtcgagtatcagctctactggccgaaaagcaacaaaccgcgcgccatactgaccacctgc
gcgaccggtatcggtgtggcgacgaatctttgcgcattgctgagcgctagtattccacag
gcgctggagattgacgtcgtcgcctgcgattatgcgatgctggtgagcaataaaacccag
gagccggtatttatgcgctacgacgtactggcgatagtcggcacgctggacccgcacatc
gccagcgtgccgtggatttcgctcgactcgctgatctccggcgaggggaaccactacctg
atgcggctgtttggttcgctgaccacgccggagcaggtggcggagatcaacaacctgctg
ctgaaaaacttctcgctccgacgagtgatcgaatccgtcaccatcctcgacaccagcaaa
gtcatcaaccacgttgagcagtttctgctgcgctatgagcatctggcgggcgttaccgtc
tcgaatgaaagaaaggtggcgctctatgtgcatattagttgcctgattgagcgtctgatc
cgccatgcgggtattactgcttatagtggacaacagtgtccggaacaggaactgaatcgg
ctacgggaagcgtttagtgtcattgagagtaactacagtgtcaaaatccccaccgccgag
cttggctatatccataatatcctgaccttcgaaacagaacttatcgagcaagatcaacag
ttttaa
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