Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_13045
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Entry
SEEH1578_13045 CDS
T02736
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SEEH1578_13045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seeh03400
]
SEEH1578_13045
Enzymes [BR:
seeh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SEEH1578_13045
DNA repair and recombination proteins [BR:
seeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SEEH1578_13045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF4351
TniQ
Motif
Other DBs
NCBI-ProteinID:
AGQ64202
LinkDB
All DBs
Position
2634046..2634837
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AA seq
263 aa
AA seq
DB search
MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQLVTRIETRGKALLTHFS
NGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKTILLYSASDIEMLTAEQLTTH
PFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFLAGLGNYLRVEILWQVG
LTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQADENKHHGALFRFKVFHRDGEACER
CGGIIEKTTLSSRPFYWCPHCQK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcccggaaattcgtcgtgcggcggataatctggaggcggcaatcaaaggc
aaacccttaaccgatgtctggtttgcctttgcacagttaaaaccgtatgaatcgcagctt
accggtcaacttgttacccggatagagacgcggggaaaagcgttattgacccacttttca
aatggcctgacgctctacagccacaaccaactctatggcgtatggcgggtgatcgatact
ggtgaaataccgcagaccacgcgtatattgcgcgtcaggctacaaacggcggataaaact
attctgctttatagcgcgtctgatatcgaaatgctgacagcagagcagctcacgacgcac
ccttttttacagcgagtcggtccggatgtgctggacgcgcgtctcactccggaagaggtt
aaagctcgattgctgtcgccgcgttttcgcaaccgacaattttccggactgttgctggat
caggcctttctggcgggattggggaattatctgcgcgttgaaatcctctggcaggtaggg
ttaaccggacagcataaagcgaaagatctcaacgaggcgcaactgaatgcgctttctcac
gcgctgttggatattccgcgcctgtcctacacgactcgcggtcaggcggatgaaaacaag
catcatggcgcactgtttcgctttaaggttttccaccgtgacggcgaagcgtgcgagcgg
tgtggcggcattattgaaaagacaacactgtcctcacgcccgttttactggtgcccgcat
tgccagaaatag
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integrated database retrieval system
