Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_13390
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Entry
SEEH1578_13390 CDS
T02736
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SEEH1578_13390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seeh03400
]
SEEH1578_13390
DNA repair and recombination proteins [BR:
seeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SEEH1578_13390
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SEEH1578_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
IF2_N
Helicase_C_2
SBDS_domain_II
UB2H
DUF4686
Motif
Other DBs
NCBI-ProteinID:
AGQ64269
LinkDB
All DBs
Position
2704912..2706435
Genome browser
AA seq
507 aa
AA seq
DB search
MTSAAILRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSL
FDPLTGQVESTVPRYTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRL
SQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQ
IGGMYRGDRARKETLVEYGFRLPSAMDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGD
EVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYL
EEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKE
GFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITP
QGLNKKVVDILALGQNIAKTKAKGKGKGRSTAKAGIVELDMTPKALQQKIHELEGQMMQH
AQNLEFEEAAQIRDQLHQLRELFIAAS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagcgcggcgattttgcgtcggctggcggaattgcaatacacccgtaacgatcaa
gcttttcagcgtggtacctttcgcgtgcgcggcgaagtgatcgacatcttcccggctgaa
tctgacgacatcgcgctacgcgttgagctgtttgatgaagaagtggaacgcctgtcgctg
ttcgacccgttaaccgggcaggtagagtcaacggtgccacgttatactatctatcccaaa
acgcactacgtaacgccgcgcgagcgtattctgcaggcgatggaagagataaaagatgag
ctggcggacaggcgtaaggtcttgctggcaaataataagctgcttgaagagcagcgatta
agccagcgcacgcagttcgatttagagatgatgaacgagctgggctactgctcaggcatt
gaaaactattcccgctttctgtcgggccgcgggccgggcgaaccgccgccaaccttgttc
gattatctgcccgccgacggactgctggtggtggatgagtctcatgtcaccatcccgcag
ataggcggcatgtaccgcggcgaccgggcgcgcaaagagacgctggtcgagtatggcttc
cgtctgccttcggcgatggataaccgtccgctgaagtttgaggagtttgaagccttagcg
ccgcaaactatctatgtttccgccacgcccggcaactatgagctggaaaaatctggtgat
gaggtggtggatcaggtcgtgcgaccgaccgggctgctggacccgattattgaagtgcgt
ccggtggcgacccaggtggacgatctgctgtccgaaattcgtcagcgtgcggccattaat
gagcgtgtccttgtcactacgcttaccaaacggatggcggaagatttgaccgaatatctg
gaagaacacggcgagcgcgtgcgttacctgcactcagatattgataccgtggagcgcatg
gaaatcatccgcgatttgcgtctgggcgagtttgacgttctggtggggattaacctgctg
cgcgaagggctggatatgccggaagtctcgctggtggcgattctggacgccgataaagag
ggcttcctgcgctccgagcgctccctgattcagaccatagggcgcgcggcgcgcaacgtt
aacggtaaagcgattctgtatggcgataaaatcacgccgtcgatggcgaaggcgattggc
gaaaccgagcgacgtcgcgagaagcagcagaagtacaacgaagagcacggtatcactccg
caggggctgaacaaaaaagtggtcgacatcctggcgctggggcagaacattgcgaaaacc
aaagcgaaggggaaaggcaagggccgttctacggcaaaagccggaattgtcgaactggat
atgacgccgaaagcgttgcagcagaaaattcatgaactggaagggcaaatgatgcagcac
gcgcaaaatctggagtttgaagaagccgcgcaaattcgcgaccagttgcaccagttacgc
gagttgtttatcgcggcgtcctga
DBGET
integrated database retrieval system
