Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_1034
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Entry
UMN798_1034 CDS
T01782
Symbol
ycbB
Name
(GenBank) putative exported protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sef01002
]
UMN798_1034 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sef01011
]
UMN798_1034 (ycbB)
Peptidases and inhibitors [BR:
sef01002
]
Cysteine peptidases
Family C82
UMN798_1034 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sef01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
UMN798_1034 (ycbB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AFD57958
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All DBs
Position
1041498..1043411
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AA seq
637 aa
AA seq
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MVAVDPRCGQRSHAEYDNENRGQGMLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMI
PGDSAVAATDLAGPQKQSAATAIMAGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLT
LLYAARDMKPMWDNRDAVKAFQQQLAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSD
AMMGYLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHP
QYAPMHDALLKLVADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG
DNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADG
VIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLAS
RVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGW
NSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQ
RDARALSSGCVRVNKASELANMLLQDAGWNDARISGALKQGDTRYVNIRQNIPVNLYYLT
AFVGADGRMQYRTDIYNYDLTARSSAQIVPKVEQLIR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttggttgcggttgacccgcgctgcgggcagcgcagtcatgcggagtatgataacgaaaac
agggggcaagggatgttgcttaataagatgtgtggtcgttgtctgtcggcaatcagttta
tgcctggccgtaacattcgctccactgttcaatgcgcaggccgatgagcctgaaatgata
cctggcgatagcgccgttgccgcgacggatctggctgggccgcagaagcaatcagccgcg
acggcgattatggccgggattcagccgctgccggagggcgtttcagccgagaaagtccgg
gctgatttacagtcgcagcttccttccggctatacgccggtctatatgagccagctgaca
ttgctgtatgccgcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagcc
ttccagcaacagttggcggaggtggcgattgccggattccagccgcagtttaccgcctgg
gtggcattgttgaccgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagac
gccatgatgggctatctccatttcattgcgaatatccccgtcaaaggccagcgctggtta
tatagcaacaaaccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaa
atcgcgctggaagagggccagttgccgatgtttgtcgccagcctggcgccgcagcaccca
cagtatgcgcccatgcatgatgcgctgctgaagctggtggcggactctcgcccgtggccg
cagttgaccaataccgcgacgctgcgcccggggcaatggagtaacgatgtgcctgcgctg
cgcgaaatattacagcgtacggggatgctggatggcggtccaaagatagccttacccggc
gataacactgctgatagcgccgtcgtcagcccctccgccgtggtcgacgaaacatcggtg
gcgcacgacgaaccaacggcccgccgtagtaagccggctccggcggcacgcgcctacgat
cgtgaactggtcgaggcggtaaagcgttttcaggcatggcaagggctgggggcggatggc
gttattggcccggcgacgcgtaactggcttaatatgacccccgcgcaacgcgcaggcgta
ctggcactgaatatccaacgtttacgcctgctgccagcggaactctctaccggtattatg
gtaaacattcccgcttattcgctggtctactatcagaatggcaaccaggtgctggcttca
agggtgatcgtcgggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataat
gtggtggtgaacccgccgtggaacgttccgcccacgcttgcgcgtaaagacattttaccg
aaggtgtggaatgacccaggctatctggagcgccatggctacaccgtgatgcgcggctgg
aacagcaaagaagcgatcgatccgtggcaggttgactgggccaccattacgccatcgaat
cttccgttccgtttccagcaggcgccaggcgcgcacaattcgctggggcgttataaattt
aatatgccgagttcagatgcgatctatctgcacgatacgcctaaccatactctctttcag
cgtgacgccagggcgttaagttccggctgcgtgcgggtcaataaggcctctgagctggcg
aatatgctcttgcaggatgctggctggaacgatgcgcggatctcaggcgccctgaagcaa
ggcgacacgcggtatgtcaatatccggcagaacattccagtaaatctttactatctgacc
gcatttgtcggcgcagatggacgtatgcaatatcgtacagatatttacaattacgatctc
acagcgcgatccagcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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