Selenomonas sp. oral taxon 136: AXE86_00260
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Entry
AXE86_00260 CDS
T04745
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
selo
Selenomonas sp. oral taxon 136
Brite
KEGG Orthology (KO) [BR:
selo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
selo03400
]
AXE86_00260
Enzymes [BR:
selo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXE86_00260
DNA repair and recombination proteins [BR:
selo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AXE86_00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
ResIII
AAA_12
AAA_16
SHOCT_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AME02644
UniProt:
A0A0X8K951
LinkDB
All DBs
Position
complement(53774..57568)
Genome browser
AA seq
1264 aa
AA seq
DB search
MADRLTFTADQQRAIDARGHNILVAAAAGSGKTRVLVERIISQVRNEELSLDRILVLTFT
KAAALEMRERIEAALNAEIDAIAGDAGISKEIDRLERQRILLTGADISTFHSFCQRLLQA
HIDATDIPPTFRLASEQEIRLLKRDVMDELLERKYEEAAQGSSDEFLAFADAYGGVKGDD
EKLKEEVLALYDFALSQPSPAVWLSRQGQEEDDAPYWKRRGFDVLARELHEKLSDLCAGY
HSTMDVLMQGDAELRTAAEKYMTVIHYNLDLYEELQGGLQLLISGAKDQAWERFRVDAAA
AKKQRKSIPHKSIENYDPELGGALKKKITNIYKAWDAAVDQLPATAEELCAAENRANTAI
RQYARLALDFHHAFQKEKLERSLLDFSDLEHRALALLCRHPEQLQDDLNSVDPTDIAEEL
RAYYAAIMVDEYQDTNGLQEGILRQIARDDNRFIVGDVKQSIYRFRLADPSLFQHTYRAY
RQGSSAGELITMSENFRSRAEVLQPINEIFSQIMTESAVEIAYDQSARLNSGRTFDDDPA
GKSLASPLEIDLLDADYSAEEADDEGEELAAFAVESHYIARRIKELVDAGYTVQSGKALR
WSDIVVLLRGAKERAVILMDALREAGIPSYADDTAGYFEASEIRMMLSLLAVLDNARQDT
PLTAVLTSPMIGMSMEELALLRIHTPVGSIYDALKGADAEEVPPAVRNKAKEALQTIRCW
RRDALLHSVPELLWHLYRTSGYYDYVGALPDGILRQANLRMLIDRAGDFERTNERGLFRF
LRYMDALRRRSTDLSAARTLGESEDVVRIMTIHRSKGLEFPVVFLANIAGAFNTQDISGD
VLYHAHAGIGVRVYENTEIGRQKYDTLGRRSVKEVIRRKTIAEEMRILYVAMTRAQEKLI
LTGTLRTSRSGLSRLAQLRDFCQQYAREEGETFPDAAILGASCYLDWIALTLMRHPDGQA
LMEGVEGIQLREWSDEKARFTVQIEKADVRTSRSEEERAADAELSAIRSGKPLPPGVRAP
YVDAVLSWTYDSRGTEQIHAKTSVTELKRENFPDEEVLPSFAPAVGAGAGGQEWEVPRFL
RTTKCAALSPMERGTAMHALMQHLDFAEVPDIAAIERQARSLFDQGILTEEAYQSLDVRN
VWRFVSSALGRRLREAKRVYRELPFGRLLPAKKYYKEAQDEADRIFLQGIIDVLFEEENG
DYILLDYKTDRHISPQDARTRYQFQIDLYCDAVETILGRPVKECYLFLLDTGREVRMERQ
AASA
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggctgacattcacagcagaccaacagcgtgcgattgatgcgagaggacac
aatattctcgtggcagcggcggcaggttccgggaagacgcgcgtattggtggagcggatt
atttcgcaggtgcggaatgaggagctgtccctagatcgtattctggttcttacctttacg
aaggccgccgctcttgaaatgcgcgagcgtatcgaggcagcactcaatgcggagatcgat
gccattgccggggatgctggcatcagcaaggaaattgaccgccttgagcgtcagcgcatt
ctgctgacaggcgcagacatttccacgtttcattcattctgccagcgacttctgcaggcg
catatcgacgcgaccgacattcctccgacatttcgtctggcaagtgagcaggaaatacgt
ctgctcaaacgcgatgtcatggatgaactccttgagcgaaaatacgaggaggcagcacag
gggagcagtgatgaatttcttgcctttgccgatgcctatggaggtgtcaagggggacgat
gagaaactcaaggaagaggtgctcgcactctatgacttcgcgctcagtcagccttcgcct
gcggtatggctcagccggcagggacaggaagaagatgatgcgccgtactggaagcggcgt
gggtttgatgtgctggcgcgagagctgcatgaaaaactgtccgatctatgtgccggatac
cacagcacaatggacgttctgatgcagggggatgcggaactgcgcacggcagctgagaaa
tacatgacagtcatccattataatctggatctctatgaggaactgcagggcgggctgcag
ctcctcataagcggcgcaaaagatcaggcatgggaacgctttcgtgtggatgcggctgct
gcaaagaaacagcggaaaagcatcccgcacaagtccatcgagaactatgatccagagctt
ggcggtgcgttgaaaaaaaagataacgaacatttacaaggcatgggacgccgctgtcgat
cagctgcccgccacagcagaggagctctgtgccgcggagaatagagcgaataccgccatt
cgccaatatgcccgtctggcattggattttcatcatgcctttcaaaaggagaaattggag
cgttctcttttggacttcagtgatctggagcatcgtgcattggcactcctgtgtcggcat
ccagagcagctgcaggatgatctgaattccgttgatccgacggatatcgcagaggagctt
cgtgcatactatgcagcgatcatggtggatgaatatcaggatacgaatgggcttcaagag
ggtatcctgcggcagatcgcgcgtgatgacaaccgctttattgtcggcgacgtgaagcag
agtatctatcgttttcggctggcggatccgagccttttccaacatacctatcgtgcctat
cgtcagggcagctctgccggtgaactgatcaccatgtcagagaacttccgcagccgcgcc
gaggtgctgcagcccatcaatgagatattctcgcagatcatgacggagtcggcggtcgag
atcgcctacgatcagagtgcacgcctgaattcgggacgcacctttgacgacgatcctgcg
gggaaatctttggcatcgccgttggagatcgatctcctggatgcggattactccgcagag
gaggcggacgatgagggcgaagagctggctgcctttgcggtggagtcacactatatcgcg
cgtcgcatcaaagagctggtcgatgcaggatatactgtccagagcggaaaagctctgcgc
tggagcgatattgtcgtcctgctgcgcggcgcaaaggaacgggcagttatcctgatggat
gccctgcgagaagcgggcattccgtcctatgcagatgatacggcagggtattttgaggca
agcgaaatacgcatgatgctttcccttctcgctgtcctggacaatgcacggcaggatact
ccgctgacggccgtcctcacatcgccgatgatcgggatgtcgatggaggaacttgccctg
ctgcgcattcacacacctgttggctcgatctacgatgctctgaagggagcagacgcagag
gaggttccgcctgctgtacgaaataaggcaaaggaggcactgcagacgataaggtgctgg
cgacgtgatgcattgctgcacagtgtgcctgagctactctggcatctataccgtacatcg
gggtactatgactatgtcggcgcacttcccgacggcattctgcggcaggcaaatttgcgc
atgctcatcgatcgtgcgggcgattttgagcgtacgaatgaacgaggtctgtttcgtttc
ctgcgctatatggatgctctgcggcggcgcagtaccgatctctctgccgcgcggacattg
ggtgagagcgaagatgtcgtgcggatcatgaccattcaccgcagtaaaggactggagttt
cccgtcgtttttctcgcaaatatagccggtgcgtttaatacgcaggatatatcaggagac
gtcctctatcatgcacatgctgggatcggcgtgcgtgtatatgagaacacggaaatcggg
cggcagaaatatgatacgctgggtcggcgaagcgtcaaagaggtgatccgccgcaagacg
atcgcggaggaaatgcgtatcctctatgttgcgatgacacgcgcgcaggaaaaactcatc
ctgacggggacactgcgcacctctcggagcggcttgagccgcttggcgcagctgcgggat
ttctgccagcaatacgcgagggaggagggagagacgttcccggatgctgccatcctcggt
gcatcctgctatctggactggattgccctaacactgatgcggcatcccgatggacaggcc
ttgatggagggggtcgagggcatccagctgcgggaatggagcgatgaaaaagcgcgattc
accgtgcagattgagaaagcagatgtacgtacgtcacgtagtgaggaggagagggcggca
gatgccgaactttctgccattcgcagcggaaagccgcttccgccgggagtacgtgcaccg
tatgtcgacgctgttctcagttggacgtatgacagcaggggaacggaacagatccacgca
aagaccagcgtaacggaactcaagcgtgaaaacttccccgatgaggaggttctgccgtcc
tttgcgcctgctgtcggcgcgggggcaggcgggcaggaatgggaagtgccgcgttttctg
cgcacgacaaagtgtgctgcattgagtccgatggagcgcggcacggccatgcatgcactc
atgcagcatcttgatttcgcggaggtgcctgacattgcggccattgagcgtcaggcacga
tcccttttcgatcagggaatcctgaccgaagaagcatatcagagcctcgatgtccgcaat
gtgtggcggtttgtttcctcggcgctcggacgccgtctgcgtgaggcgaagcgtgtatat
cgtgagctgccgttcgggcggctcctgccggcgaagaaatactataaggaggcacaggac
gaggcagatcgcattttcctgcagggtatcatcgacgtcctctttgaggaagaaaacggc
gattatattcttctcgactataagacggatcgtcatatttctccgcaggatgcacgcaca
cgctatcagttccagattgacctatactgtgatgccgtagagacgatccttgggcgacca
gtgaaggaatgctacctgtttttgctggatacaggtcgtgaagtacgcatggagcgtcag
gcggccagtgcatag
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