Spirosoma endbachense: GJR95_08975
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Entry
GJR95_08975 CDS
T09865
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
senf
Spirosoma endbachense
Pathway
senf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GJR95_08975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senf03021
]
GJR95_08975
Transcription machinery [BR:
senf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJR95_08975
BRITE hierarchy
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r4
Sigma70_ECF
Sigma70_r2
HTH_24
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QHV95138
LinkDB
All DBs
Position
complement(2302389..2302928)
Genome browser
AA seq
179 aa
AA seq
DB search
MPEKILCTNPIRIDEQSFREMYLQYWEQVFNVCYSNLRDVEAAKGMVQDIFKSLWERRDE
LEITTSVERYLLRSAKFKVFEYLRNSKIRQEHTAKSVAYECAAANSTENEVLYNSLKEKV
SHLVDTLPAQCQNVFKMSREQGLSNKEIASMLLISERAVEYHITRALATLKTNLSEYFI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaagatactttgtaccaatcctattagaatcgatgaacaatcgtttcgggag
atgtatttgcagtattgggagcaggtgtttaacgtttgttacagtaatttacgcgatgtt
gaagctgccaaaggaatggtgcaggatattttcaagtcgctttgggaacggcgcgatgag
ctggaaatcacaacatcggtagaacggtatttacttcgctcggctaagttcaaggttttt
gaatacctgcgaaacagtaagattcggcaggaacacacggcaaaatcagtggcttatgag
tgtgcagctgctaatagtaccgaaaacgaggtactctataatagcttgaaagaaaaggtc
agtcatcttgttgatactttacccgcccagtgtcagaatgtgtttaaaatgagccgcgag
cagggattatccaataaggaaatcgcttcaatgcttttgatttcggaacgggccgtcgag
taccacattacccgcgccctggcaacgctgaaaactaatctttctgaatacttcatctag
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