KEGG   Spirosoma endbachense: GJR95_35585
Entry
GJR95_35585       CDS       T09865                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
senf  Spirosoma endbachense
Pathway
senf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:senf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GJR95_35585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:senf03021]
    GJR95_35585
Transcription machinery [BR:senf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GJR95_35585
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_24 GerE HTH_40 HTH_38 HTH_30 HTH_Mga HTH_5 HTH_11 HTH_10 HTH_AsnC-type HTH_DeoR HTH_23 TetR_N HTH_17 HTH_28 HTH_Tnp_ISL3 LexA_DNA_bind ASFV_360
Other DBs
NCBI-ProteinID: QHW00016
LinkDB
Position
8849806..8850381
AA seq 191 aa
MSLHLLTDNELLALLREDDEQAFRELYDRYWYKMYVIAHRKLRRKEVAEELAQELFVMIW
QKRESLRVINLQAFLGVSLKNLMIDYIRRNIQEEHYLDQLQRFFPAKTFATMEAVQLNEL
SEAIQSALAKLPEKTREIFILNRFEHLTIREIAQRLNLSEKTIEYHLSRSTTFLRQNLRD
FMTAWVLYLLS
NT seq 576 nt   +upstreamnt  +downstreamnt
atgtccctgcacctgttaaccgacaacgaattgttggccctactccgagaagatgacgag
caggcgttcagggagttatatgatcgatactggtataaaatgtatgtgatcgctcaccgt
aaacttcgccgtaaagaagttgccgaagaactggcacaggagctttttgtgatgatctgg
cagaaacgggaatcgctgcgggtcattaatttacaggcgtttttgggcgtatcgctcaag
aacctgatgatcgactacatccgccggaatattcaggaagagcactatctggatcagctc
cagcgctttttcccggccaaaacctttgctacgatggaagccgttcaactgaacgaacta
tccgaagcgatccaaagcgctctggcgaaactccccgagaaaacccgagaaatattcatt
ctcaatcggttcgaacacctcaccattcgcgaaatagctcagcgcttgaacctgtcagaa
aaaacaattgagtaccacctctcccgatccactacttttttgcgtcagaatctgcgcgat
ttcatgacggcctgggttctgtatctgctctcctag

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