Spirosoma endbachense: GJR95_35585
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Entry
GJR95_35585 CDS
T09865
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
senf
Spirosoma endbachense
Pathway
senf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GJR95_35585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senf03021
]
GJR95_35585
Transcription machinery [BR:
senf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJR95_35585
BRITE hierarchy
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_24
GerE
HTH_40
HTH_38
HTH_30
HTH_Mga
HTH_5
HTH_11
HTH_10
HTH_AsnC-type
HTH_DeoR
HTH_23
TetR_N
HTH_17
HTH_28
HTH_Tnp_ISL3
LexA_DNA_bind
ASFV_360
Motif
Other DBs
NCBI-ProteinID:
QHW00016
LinkDB
All DBs
Position
8849806..8850381
Genome browser
AA seq
191 aa
AA seq
DB search
MSLHLLTDNELLALLREDDEQAFRELYDRYWYKMYVIAHRKLRRKEVAEELAQELFVMIW
QKRESLRVINLQAFLGVSLKNLMIDYIRRNIQEEHYLDQLQRFFPAKTFATMEAVQLNEL
SEAIQSALAKLPEKTREIFILNRFEHLTIREIAQRLNLSEKTIEYHLSRSTTFLRQNLRD
FMTAWVLYLLS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcacctgttaaccgacaacgaattgttggccctactccgagaagatgacgag
caggcgttcagggagttatatgatcgatactggtataaaatgtatgtgatcgctcaccgt
aaacttcgccgtaaagaagttgccgaagaactggcacaggagctttttgtgatgatctgg
cagaaacgggaatcgctgcgggtcattaatttacaggcgtttttgggcgtatcgctcaag
aacctgatgatcgactacatccgccggaatattcaggaagagcactatctggatcagctc
cagcgctttttcccggccaaaacctttgctacgatggaagccgttcaactgaacgaacta
tccgaagcgatccaaagcgctctggcgaaactccccgagaaaacccgagaaatattcatt
ctcaatcggttcgaacacctcaccattcgcgaaatagctcagcgcttgaacctgtcagaa
aaaacaattgagtaccacctctcccgatccactacttttttgcgtcagaatctgcgcgat
ttcatgacggcctgggttctgtatctgctctcctag
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