Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_09820
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Entry
CFSAN001992_09820 CDS
T02479
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj03030
DNA replication
senj03430
Mismatch repair
senj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFSAN001992_09820 (dnaE)
03430 Mismatch repair
CFSAN001992_09820 (dnaE)
03440 Homologous recombination
CFSAN001992_09820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senj03032
]
CFSAN001992_09820 (dnaE)
03400 DNA repair and recombination proteins [BR:
senj03400
]
CFSAN001992_09820 (dnaE)
Enzymes [BR:
senj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFSAN001992_09820 (dnaE)
DNA replication proteins [BR:
senj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFSAN001992_09820 (dnaE)
DNA repair and recombination proteins [BR:
senj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFSAN001992_09820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGF82272
LinkDB
All DBs
Position
complement(1951552..1955034)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDW
LVELKEGLILLSGGRMGDVGRCLLRGNQALVEECVAFYEAHFPDRYFLELIRTGRQDEET
YLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSIDEMCELFADIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL
EERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIDARNQGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgttcacctgcgggtgcacagcgactactctatgatcgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcattaggtatgcctgcgctggcg
atcaccgattttaccaacctctgcggtctggtgaagttctacggagcgggtcatggcgcg
ggcattaaacccatcgtcggggcggactttaacgttcacaacgaactgctgggagatgag
ctgactcatctgacggtactggcggcgaataatacgggataccagaacctgacgttgctg
atctcgaaagcgtatcagcgcggctacggcgcggcaggcccgattatcgagcgcgactgg
ctggtagagcttaaagaaggtttgatcctgctttccggcgggcgcatgggcgacgtaggc
cgctgtctgctacgcggcaaccaggcgctggtggaggagtgcgttgctttctatgaagcg
cattttcccgatcgctactttctggaactgatccgtaccggcagacaggatgaagagacc
tatctccatgctgcggttgaattggctgaggcacgtggtttgccggttgtcgcgacaaac
gatgtccgttttcttgaaagcgatgattttgacgcccatgaaattcgtgtcgcgatccac
gacggtttcacgcttgacgatcctaagcgtccgcgcaattactcgccgcagcaatatatg
cgcagcatcgatgagatgtgcgaactgttcgccgatattccggaggcgctggaaaatacg
gtggagattgccaaacgctgcaacgtaacggtgcgtctgggtgaatatttcctgccgcag
ttcccgaccggcgatatgaccaccgaagattatctggtcaaaaaatcgaaagaggggctc
gaagaacgtctggctttcctgtttccggacgaagaagagcgcaaaaagcgtcgcccggaa
tatgacgagcgtctggatattgaactacaagttatcaaccagatggggttccctggctac
ttcctcatcgtgatggagtttatccagtggtcaaaagataacggcgtgccggtagggccg
ggacgtggctccggggccggttcgctggtggcctacgcgctgaaaattaccgaccttgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgagcacgtcgcagac
atgtacgggcgtgatgcggtatcgcaaattatcaccttcggtacgatggcggcgaaagcc
gttatccgcgatgtgggccgcgtgctggggcatccgtacggttttgtcgatcgtatctcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagcggaaccgcaa
ctgccggaaatttacgaggcggacgaagaggtcagagcgctgatcgatatggcgcgtaag
cttgaaggcgtcacgcgtaacgccggtaaacacgctggcggcgtggtcattgcgccgacc
aaaattaccgactttgcgccgctgtactgcgatgaagagggcaagcatccggttacccag
tttgataaaagcgacgtggaatatgccgggctggtgaagttcgacttcctcggtttgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacaagcggcgcgagaaaaacggc
gagccgccgctggatatcgccgccattccgctggacgataaaaaaagcttcgacatgctg
cagcgctcggaaaccacggcggtcttccagcttgaatcgcgcggcatgaaagatctgatc
aaacgtctgcagccggactgctttgaagatatgatcgcactggtggccctgttccgtccc
ggcccgttgcagtcagggatggtagataactttatcgaccgtaagcacggtcgtgaagaa
ctctcttacccggacgttcagtggcagcatgaaagcctgaagccggtactggagccgact
tacggcatcattctgtatcaggaacaggtgatgcagattgcccaggtactttccgggtat
actctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaaacagcgttccgtttttgaagagggcgcgaaaaagaacggtatcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacgggtttaacaaatcgcac
tccgccgcttatgcgctggtttcttatcagacgctatggctaaaggcgcactatccggct
gaatttatggcggcggtgatgactgccgatatggacaacaccgagaaggtcgtcggcctg
gtggacgagtgctggcggatgggactaaaaattctgccgccggatattaactccggattg
taccatttccacgttaacgatgagggcgagatcgtctacggcatcggcgcgatcaaaggc
gtcggcgaagggccgatcgaagcgatcatcgacgcgcgtaatcagggcggctatttccgc
gaactgtttgatctgtgcgcgcggaccgacaccaaaaagctcaaccgccgggtgctggaa
aagctgatcatgtccggggcgttcgaccgcctggggccgcaccgcgccgcgctgatgaac
tcattgggcgatgcgctgaaagccgccgaccagcacgccaaagcggaagctatcggtcag
gcggatatgttcggcgtactggcggaagagccggagcaaatcgaacaatcctatgctagc
tgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacgttggggctgtac
ctgacgggccaccctatcaatcagtatttaaaagaaattgagcgctatgtcggcggggta
aggctcaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtg
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggataaataccagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagctcgcgaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcgcggctgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttacttaatgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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integrated database retrieval system
