Secondary endosymbiont of Trabutina mannipara: TRABTM_A_01220
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Entry
TRABTM_A_01220 CDS
T04494
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
senm
Secondary endosymbiont of Trabutina mannipara
Brite
KEGG Orthology (KO) [BR:
senm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
senm03009
]
TRABTM_A_01220 (rsmD)
Enzymes [BR:
senm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
TRABTM_A_01220 (rsmD)
Ribosome biogenesis [BR:
senm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TRABTM_A_01220 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
RrnaAD
GSH-S_N
N6-adenineMlase
UPF0020
Motif
Other DBs
NCBI-ProteinID:
SBT81983
UniProt:
A0A1C3L3W9
LinkDB
All DBs
Position
I:complement(120149..120742)
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AA seq
197 aa
AA seq
DB search
MIFKKNKKFTNNCPTGIIRIIGGMWRGSKILVPNRTALRPTPNRVRETLFNWLAPFIRGA
HCLDCFAGSGALGIEALSRAAASVTLIEQDRLISQQLLNKLQLLQTKQAQVITTDTNLWL
AHSSDANKFDIVFIDPPFNQGMISKTVAFLEYYNHLAKKSWIYIETEKKGTYSIPINWKI
YKEKVAGKVAYRLYLRT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgatttttaaaaaaaataaaaaatttactaataattgtcctactggaataattcgtatt
attggtggtatgtggcgtggtagtaaaattttagtgccaaataggacagctttgcgacct
actcctaacagagtacgggaaactttatttaattggttagcgccgtttattaggggggca
cactgtctagattgtttcgctggaagcggggctttgggcatagaggcattatctcgtgct
gctgctagcgtaacactaattgagcaagatagattaattagtcaacaacttttaaataag
ttgcaactattacagacaaaacaagcgcaggttatcactacagataccaatttgtggcta
gcacattcatcagatgctaataagtttgatattgtttttattgatcctccatttaatcag
ggtatgatatctaaaaccgtagcttttctagagtattacaatcatcttgcaaaaaaatct
tggatttacatcgaaactgaaaaaaaaggtacctattctatacccattaattggaaaata
tataaggaaaaggttgcaggaaaagtagcatacaggctatatttacgtacataa
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