Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_46840
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Entry
SN31241_46840 CDS
T02779
Name
(GenBank) HTH-type transcriptional activator rhaR
KO
K02854
AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senn03000
]
SN31241_46840
Transcription factors [BR:
senn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SN31241_46840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
ARD
Motif
Other DBs
NCBI-ProteinID:
AGS31652
LinkDB
All DBs
Position
complement(4743377..4744225)
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AA seq
282 aa
AA seq
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MANQLILLKKDFFTDEQQAVTVADRYPQDVFAEHTHEFCELVMVWRGNGLHVLNERPYRI
TRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPERLKLNVNWQAMIPGFQGAQWHPHWRLGS
MGMNQARQVINQLEHESNGRDPLANEMAELLFGQLVMTLKRHRYATDDLPATSRETLLDK
LITALANSLECPFALDAFCQQEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHS
PLMISEISMQCGFEDSNYFSVVFTRETGMTPSQWRHLSNQSD
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatcagttaatccttttgaaaaaagatttttttactgatgagcagcaggccgtt
acggttgccgatcgctatccacaggatgtttttgcggaacatacgcatgagttttgtgaa
ctggtgatggtctggcggggcaatggcctacacgttcttaatgagcgcccatacagaatt
acccgcggcgatctgttttacattcgtgctgaagacaaacactcctatacttccgttaac
gatctggtgctgcaaaatattatttactgcccggagcgtttgaaactcaatgtaaactgg
caggcgatgattcccggctttcagggagcgcagtggcatcctcactggcggctgggcagt
atgggaatgaatcaggcgcggcaggtcattaaccagcttgaacatgagagtaatggacgc
gatccgctggcgaatgagatggcggaattgctgtttggtcaactggtgatgacgttaaaa
cggcatcgctacgcgaccgacgatcttccggcaacctcccgagaaaccctgttggataaa
ttaattaccgctttggctaatagtcttgagtgtccctttgcgctggatgcgttttgccag
caggaacaatgcagcgaacgggtgctgcggcagcagtttcgcgcccaaaccgggatgacg
attaatcaatatttacgccaggtccgtatttgccacgcgcagtatctgcttcagcatagc
ccgctgatgattagcgagatttcgatgcagtgcggttttgaagatagcaattatttttca
gtggtgttcacgcgggaaaccgggatgacgccgagccaatggcgtcatctcagtaatcaa
agcgattaa
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