Salmonella enterica subsp. enterica serovar Enteritidis EC20090193: AU37_03850
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Entry
AU37_03850 CDS
T03732
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
seno
Salmonella enterica subsp. enterica serovar Enteritidis EC20090193
Pathway
seno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AU37_03850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seno03400
]
AU37_03850
DNA repair and recombination proteins [BR:
seno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AU37_03850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AU37_03850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
IF2_N
AAA_22
SBDS_domain_II
DUF4686
Motif
Other DBs
NCBI-ProteinID:
AHP73107
LinkDB
All DBs
Position
823582..825603
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AA seq
673 aa
AA seq
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MSKPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPR
YTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGKGKGRSTAKAGIVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggacgct
atacgtcgtctggaagaggggctggaggacgggctggcgcatcagacgttattgggcgtg
accggctccgggaagacattcaccattgccaacgtcattgcggacttgcagcggccaacg
atggtgcttgcgcccaataaaaccctggcggcgcagctctacggcgaaatgaaagagttt
ttcccggaaaacgcggtggagtatttcgtctcctactatgactactatcagccggaagcg
tatgtgccaagttcggatacgtttatcgaaaaagacgcttcggtaaacgaacatattgag
caaatgcggttgtcggcaacgaaagcgttgcttgagcgacgcgatgtcgtggtggtggct
tccgtgtccgcgatttacggtctgggcgatccggatctctacctgaaaatgatgctgcat
ctgacggtgggaatgctgattgaccagcgcgcgattttgcgtcggctggcggaattgcaa
tacacccgtaacgatcaagcttttcagcgtggtacctttcgcgtgcgcggcgaagtgatc
gacatcttcccggctgaatctgacgacatcgcgctacgcgttgagctgtttgatgaagaa
gtggaacgcctgtcgctgttcgacccgttaaccgggcaggtagagtcaacggtgccacgt
tatactatctatcccaaaacgcactacgtgacgccgcgcgagcgtattctgcaggcgatg
gaagagataaaagatgagctggcggacaggcgtaaggtcttgctggcgaataataagctg
cttgaagagcagcgattaagccagcgcacgcagttcgatttagagatgatgaacgagctg
ggctactgctcaggcattgaaaactattcccgctttctgtcgggccgcgggccgggcgaa
ccgccgccaaccttgttcgattatctgcccgccgacggactgctggtggtggatgagtct
catgtcaccatcccgcagataggcggcatgtaccgcggcgaccgggcgcgcaaagagacg
ctggtcgagtatggcttccgtctgccttcggcgctggataaccgtccgctgaagtttgag
gagtttgaagccttagcgccgcaaactatctatgtttccgccacgcccggcaactatgag
ctggaaaaatctggtgatgaggtggtggatcaggtcgtgcgaccgaccgggctgctggac
ccgattattgaagtgcgtccggtggcgacccaggtggacgatctgctgtccgaaattcgt
cagcgtgcggccattaatgagcgtgtccttgtcactacgcttaccaaacggatggcggaa
gatttgaccgaatatctggaagagcacggcgagcgcgtgcgttacctgcactcagatatt
gataccgtggagcgcatggaaatcatccgcgatttgcgtctgggcgagtttgacgttctg
gtggggattaacctgctgcgcgaagggctggatatgccggaagtctcgctggtggcgatt
ctggacgccgataaagagggcttcctgcgctccgagcgctccctgattcagaccataggg
cgcgcggcgcgtaacgttaacggtaaagcgattctgtatggcgataaaatcacgccgtcg
atggcgaaggcgattggcgaaaccgagcgacgtcgcgagaagcagcagaagtacaacgaa
gagcacggtatcactccgcaggggctgaacaaaaaagtggtcgacatcctggcgctgggg
cagaacattgcgaaaaccaaagcgaaggggaaaggcaagggccgttctacggcaaaagcc
ggaattgtcgaactggatatgacgccgaaagcgttgcagcagaaaattcatgaactggaa
gggcaaatgatgcagcacgcgcaaaatctggagtttgaagaagccgcgcaaattcgcgac
cagttgcaccagttacgcgagttgtttatcgcggcgtcctga
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