Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_43221
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Entry
STMDT2_43221 CDS
T02869
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr03030
DNA replication
senr03430
Mismatch repair
senr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STMDT2_43221 (holC)
03430 Mismatch repair
STMDT2_43221 (holC)
03440 Homologous recombination
STMDT2_43221 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senr03032
]
STMDT2_43221 (holC)
03400 DNA repair and recombination proteins [BR:
senr03400
]
STMDT2_43221 (holC)
Enzymes [BR:
senr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STMDT2_43221 (holC)
DNA replication proteins [BR:
senr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STMDT2_43221 (holC)
DNA repair and recombination proteins [BR:
senr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STMDT2_43221 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CDG10476
LinkDB
All DBs
Position
complement(4677468..4677911)
Genome browser
AA seq
147 aa
AA seq
DB search
MKNATFYLLDNDTTVNGLSAVEQLVCEIAAERWRAGKRVLIACEDEKQAIRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRNSSPRDILISLRTSFADFATAFTEVVDFVPYE
ETLKQLARERYKAYRVAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcgacgttctatcttctggataatgacaccaccgtcaacggtttaagcgcc
gttgaacaactggtgtgtgaaattgccgcagaacgttggcgcgcgggcaagcgcgtgctg
atcgcctgcgaagatgagaagcaggccattcggctggatgaagcgctgtgggcaagaccg
gcggaaagttttgtcccgcacaatctggcaggcgaaggcccacgcggcggcgcgccggtt
gaaatcgcctggccgcaaaaacgcaacagcagcccgcgcgatattttaatcagcctgcgt
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgtcccttacgaa
gaaactttgaaacaactggcgcgcgaacgctacaaagcctaccgcgtggctggttttaac
ctgaatacggcaacctggaaataa
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