Sodalis endosymbiont of Henestaris halophilus: HBA_0411
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Entry
HBA_0411 CDS
T05311
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03030
DNA replication
seny03430
Mismatch repair
seny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBA_0411 (holB)
03430 Mismatch repair
HBA_0411 (holB)
03440 Homologous recombination
HBA_0411 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seny03032
]
HBA_0411 (holB)
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0411 (holB)
Enzymes [BR:
seny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBA_0411 (holB)
DNA replication proteins [BR:
seny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBA_0411 (holB)
DNA repair and recombination proteins [BR:
seny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBA_0411 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
BLF1
Motif
Other DBs
NCBI-ProteinID:
SNC58665
UniProt:
A0A2C8CWP7
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All DBs
Position
I:687323..688318
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AA seq
331 aa
AA seq
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MKWYPWLTVPYRDILSRYQLARGHHALLLHSKPGTGELSLCYAISRWLICRQPNGIKSCG
RCHSCRLMLAGNHPDFYQPELEKNQQSLGGDSIRTIIDGLYERAYQGGMKVVSLLYVEQL
TELAVNVLLKTLEEPPENTYFLLVCQTPARLLATLRSRCFYWLLRTPHEELGLRWLREMG
YDNPLSAVTALRLCDGAPLAAKILLNPIRWQVREELCVVLREVLTHGDLLALLPTLNRDK
DIKPLHWLLSLLTDALKWQQNAQEFIINADKTPLVAELAARWPARVLMIHWQQLLHCLLQ
CQEISGVNRELFLTYHLLNCEYGVANAYAFL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccctggctcactgttccttatcgggatattctgtctcgatatcagtta
gcgcgcgggcatcatgccctactactgcatagtaagcccggcactggagagctgtcgttg
tgctatgctatcagccgttggttaatatgccgacagccaaacggtattaaaagctgtggt
cgttgtcatagttgccgtcttatgctggccggcaatcatcccgacttttatcaaccagag
ctggaaaaaaaccagcagagtttgggaggagacagtatccgtactattatagatggctta
tatgagcgcgcttatcaaggcggaatgaaagttgtttcgctgctttacgttgagcaactt
acggagctcgcagttaatgtactattaaaaactttagaagaaccacctgaaaatacttat
tttttgctagtttgccagacgccagcgcgtttgttggcaacgctgagaagccgatgtttt
tattggttgctgcggaccccgcatgaagagctaggcctgcgttggttacgggagatgggt
tatgataatccgctgtcagcagtcactgcactgcgtctgtgcgacggtgcacccttagca
gcaaagattttgctgaatccgattcgctggcaggttcgggaggaattgtgcgtagtattg
cgagaagttcttacccacggagatttattagcgctgctgccgacgctaaatcgagataaa
gatatcaaaccgctgcattggttgctgagcttgttgactgatgcactgaaatggcagcaa
aatgctcaagaatttataatcaacgctgataagactcctttagtggctgagttggcggcg
cgctggccagctcgcgtgcttatgattcattggcagcagttgctgcattgtttgctccaa
tgtcaagagataagcggtgttaatagagaattatttttgacttaccatttgctgaattgt
gaatatggcgtcgcgaatgcctatgctttcttataa
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