Prodigiosinella confusarubida ATCC 39006: Ser39006_004290
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Entry
Ser39006_004290 CDS
T05290
Name
(GenBank) glycogen debranching protein GlgX
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00500
Starch and sucrose metabolism
sera01100
Metabolic pathways
Module
sera_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Ser39006_004290
Enzymes [BR:
sera01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
Ser39006_004290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgX_C
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AUH03419
UniProt:
A0A2I5TFT7
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All DBs
Position
933160..935133
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AA seq
657 aa
AA seq
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MTVLREGHSTPLGSHFDGNGVNFALFSAGAERVELCVFDEHQREQRLPLTGRTGDIWHGY
LPGALPGLRYGFRVDGPFDPLNGLRFNPHKLLLDPRARLMDGQVVDDEILHGGHERRDER
DSACVMPKCVVIDDDYDWQDDRFPQVPWGKTVIYEAHVRGLTKRYTAIPSAIRGTYAALA
HPLILDYLTHLGITTLELMPIQQHADEPRLQELGLRNYWGYNMLLPFAVDNSLSASDDPL
NEFREAVRLLHNAGIEVILDVVFNHSAELDIYGPTLSLRGIDNASYYWLNQDGTYKNWTG
CGNVLRLDHPAVVDWVMDCLIFWHEECHVDGFRFDLATVMGRMPDFSTSAPLFTVLQQHH
RLRGCKLIAEPWDIGCGGYQLGKFPLLFAEWNDRYRDDMRRFWLHGTLSLGEFARRFAAS
SDVFEHHGREPWASINMLTAHDGFTLCDLVSFNHKHNGANGEHNRDGANSNFSYNHGIEG
LDADTEIQLRRRVSQQALLTTLLLSQGTPMLLAGDEFGHSQQGNNNAYCQDNLMTWLEWL
DADKTLIAFTAGLISLRKSIPALQKESWWRADENVVQWLNTQGEPLTPHEWEQGEHRIQI
QLSERWLLLINACPQACDMILPEGEWQVSSPFDATENPIDNRIWHGKAHAVCVLVKK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtactgcgagaaggtcattcgacgccgttaggatcgcactttgatggtaacggc
gtcaattttgccctgttttctgccggagcggagcgggttgaactgtgtgtgtttgatgaa
caccagcgagaacaacggttgccgttgacagggcgtaccggggatatctggcacggttat
ctgccgggcgccctcccggggttgcgttatggtttccgggttgacggcccgtttgatccg
ctgaatggattgcgttttaacccgcacaagctgttgctcgatcctcgagccagactgatg
gatggtcaggtcgtggatgatgagattctgcatggcggccatgaacgacgtgatgaacgt
gacagcgcctgcgttatgcccaaatgcgtggtgattgatgacgattatgactggcaggat
gaccgttttccgcaagttccctggggaaaaaccgtgatttacgaggcccatgtgcgcggg
ttgaccaagcggtatacggcgatcccttcggcaattcgtggcacctatgcggcactggcg
catccgctgatattggattatctgacccacctcggcattaccacactggagctgatgccc
attcagcagcatgccgatgagccacgcctgcaagagttgggactacgtaattactggggt
tataacatgctgctgccgttcgcggtggataacagtctgtcggccagtgatgatccgctc
aatgagttccgtgaggcggtgcggttactacacaacgcgggtatcgaagtgattctggat
gtggttttcaatcacagcgcagaactggatatctacggcccgacactctcattgcgcggt
atcgataacgccagttattactggttgaatcaggacgggacttataaaaactggaccggt
tgcggcaatgtgctgcgcctggatcatccggcggttgtcgattgggtgatggactgtctg
attttctggcatgaagagtgccatgtggatggtttccgttttgatctggcaacggttatg
gggcggatgccggattttagcacttccgcgccattatttactgtcctgcaacagcatcat
cgactgcgaggttgcaagttgattgccgaaccgtgggatatcggttgcggtggttatcag
ttaggaaaatttccgctgctgtttgcagaatggaatgatcgttaccgcgatgatatgcgc
cgtttctggttacacggcactctgtctctgggggaatttgcccgtcgttttgccgcctcc
agcgatgtatttgaacatcatggtcgagagccctgggcctcgatcaatatgctcaccgcc
cacgatggttttactttgtgcgacctggtgagcttcaaccataaacataacggagccaac
ggcgagcataaccgggatggggccaacagcaatttcagttataaccacgggatcgaaggg
ctggatgcggatacggaaatacagctccggcggcgagtcagtcagcaggcattgctgacc
acactcttgttatctcagggaacgccgatgctgttggcgggcgacgagtttgggcacagc
cagcaaggcaataacaatgcctactgccaggataatttgatgacctggctggagtggctg
gatgcagataaaacattgattgcgttcactgccgggctgatcagtttacgaaaatcgatc
ccggcattgcaaaaggagtcgtggtggcgtgctgacgagaatgtcgtgcagtggctgaat
acacagggagagccattgacgccgcacgaatgggaacaaggggagcaccggatacaaata
caactttccgaacgttggctattactgattaacgcttgcccgcaagcatgcgacatgatc
ctgccggaaggcgaatggcaggtgtcctcgccgtttgatgcaacagaaaatccgattgat
aaccggatatggcacggaaaagcgcatgcagtgtgtgttcttgtgaagaagtga
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