Prodigiosinella confusarubida ATCC 39006: Ser39006_021660
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Entry
Ser39006_021660 CDS
T05290
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00521
Streptomycin biosynthesis
sera00523
Polyketide sugar unit biosynthesis
sera00541
O-Antigen nucleotide sugar biosynthesis
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01250
Biosynthesis of nucleotide sugars
Module
sera_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Ser39006_021660 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Ser39006_021660 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Ser39006_021660 (rfbC)
Enzymes [BR:
sera01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Ser39006_021660 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AUH06490
UniProt:
A0A2I5TPL0
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All DBs
Position
complement(4751487..4752047)
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AA seq
186 aa
AA seq
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MNVINTEIPDVKIIEPVVFGDERGFFMETWQQKKFEDMVVKRPCNFVQDNHSKSRQGILR
GLHYQTENAQGKLVRVISGEVYDVAVDIRKSSSTFGQWTGVYLSAENKRQLWIPEGFAHG
FYVTSHEAEFVYKCTDYYNPNAEQSILWNDPDLGIEWPLTGIPVLSEKDKKGIYFNSICG
VGAKLF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttatcaatactgaaattcctgatgtaaaaattattgaacccgttgtatttggt
gatgaacgtggtttttttatggaaacctggcagcaaaaaaaattcgaggatatggtggta
aaacgcccttgcaattttgttcaggacaatcattcaaaatcgagacaaggcattttacgc
ggtcttcattatcagactgagaatgctcaaggtaagttggtgcgtgttatttctggtgag
gtttacgatgttgccgttgatatacgtaaatcgtcatccacgtttggtcaatggaccggt
gtttacctttctgctgaaaacaagcgtcaactttggattcctgaaggatttgcgcatggt
ttttatgtgaccagtcatgaagccgaattcgtttataaatgtactgattattataatccc
aatgctgagcagtccattttatggaatgaccctgatcttggtattgaatggccgttgaca
ggcattcctgttttatccgaaaaagataaaaaaggtatatatttcaatagtatttgtggt
gttggagccaaattgttttga
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