Serratia sp. FS14: L085_11920
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Entry
L085_11920 CDS
T03313
Name
(GenBank) putative ATP-dependent DNA or RNA helicase
KO
K19789
DNA repair protein RadD
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_11920
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
L085_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
AAA_16
zf-ribbon_3
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
AAA
UPF0547
Motif
Other DBs
NCBI-ProteinID:
AIA47819
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Position
complement(2622349..2624106)
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AA seq
585 aa
AA seq
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MAFTLRPYQLEAVEATINHFRRRPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKESAGKVVFGSVQSVARNLPLFDGAFSLLIVDECH
RISDDDDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDGASLFRD
CIYELPLRYMIKNGFLVPPERLDMPIVQYDFSRLEARSNGLFSEADLNRELKRQNRVTPH
IISQIVEYADDRKGVMIFAATVEHAREIHGLLPNGEAALVSAETPPAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHGDSQPVQVFCPACGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDDKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWHTA
ADVLAQQQALRHPDFVVARKRGQFWQVREKVFDYQGRFRRANQLT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctacgcccctaccaactggaagcggtcgaagccaccatcaaccatttc
cggcggcgtcccgaaccggcgctgatcgtgctgccgaccggcgccggcaaaagcctggtg
atcgccgaactggcgaagcgagcccgtgggcgggtgctggtgttggcgcacgtcaaggaa
ctggtggcgcaaaaccacgccaaatactgcgcctacggcctggaggcggacatcttcgcc
gccggtctgcaacaaaaagagagcgccggcaaagtggtgttcggcagcgtgcagtcggtg
gcgcgcaacctgccgctgttcgacggcgccttttcgctgctgatcgtcgatgaatgccac
cgcatcagtgacgacgacgacagccagtaccaacaaatcatccagcatttgcagaaaacc
aacccgcagctgcggctgctggggttgaccgccacgccctatcgtctgggcaagggctgg
atttaccagtatcactaccacggttttacccgcggcgacggcgccagcctgtttcgcgac
tgcatctatgagctgccgctgcgctatatgattaagaacggcttcctggtgccgcctgag
cggctggacatgccgattgtacagtacgatttcagccggctggaggccagaagcaacggc
ctgttcagcgaagcggatctgaaccgcgagctgaagcggcaaaaccgcgtcacgccgcac
attatcagccagattgtggagtacgccgacgatcgcaaaggggtaatgatcttcgccgcc
accgtcgagcacgcccgcgagatccacggcctgctgccgaacggcgaggccgcgctggtc
agcgcagaaacgccgcccgccgagcgcgatgcgctgatcgaggcgttcaaacagcagcag
ttgcgctatctggtcaacgtagcggtattgaccaccggtttcgacgcgccgcacgtcgat
ctgatcgcgatcctgcgcccgaccgagtccgtcagcctgtatcagcagatcgtcggccgc
gggctgcggctggcgcccggcaaggaggattgtctgatcctcgactatgccggcaacccg
cacgatctgtttacgcctgaggtcggcgtcagcaagccgcacggcgacagccagccggtg
caggtgttctgcccggcctgcggcttcgccaatctgttctggggcaagtgcaccgagaac
ggcgatatcatcgagcactacggccgccgctgtcagggctggctggaagacgacgacggc
caccgcgaacagtgcgattaccgcttccggttcaagagctgcccgcactgcggcgcggag
aacgacatcgccgcacgccgctgccatcagtgtcaggaggtgctggtcgatcccgatgac
atgctgaaggcggcgctgaagctgaaagacgcgctggtgctgcgctgcggcggcatggaa
ctgcagagcggccgcgatgacaagggcgaatggctgaaggccacctattacgacgaggac
ggcaccagcaccagcgagcgcttccgcctgcagacgccggcgcagcgcaaagccttcgag
atgctgttcctgcgcccgcaccagcgcgcgccgggcgtgccgttcgcctggcacaccgcc
gccgacgtgctggcgcaacaacaggcgctgcgccatccggatttcgtggtggcgcgcaaa
cgcggccagttttggcaggtgcgcgagaaagtgttcgattatcaaggccgtttccgccgc
gccaatcaattgacctga
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