Serratia sp. MYb239: CLM71_07295
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Entry
CLM71_07295 CDS
T05477
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00521
Streptomycin biosynthesis
serm00523
Polyketide sugar unit biosynthesis
serm00541
O-Antigen nucleotide sugar biosynthesis
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01250
Biosynthesis of nucleotide sugars
Module
serm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CLM71_07295 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLM71_07295 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLM71_07295 (rfbC)
Enzymes [BR:
serm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CLM71_07295 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
AVJ16948
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Position
1532120..1532656
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AA seq
178 aa
AA seq
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MQVTDSKISGVKIIQPKVFGDARGFFLETFEKKRYQEMLNIDLDFVQDNHSRSAKGVLRG
LHFQKVNPQGKLVRVVRGEVFDVAVDIRPDSPTFGQWEGVILSEENKTQFWVPPGLAHGF
VVLSDIADFEYKCTDYYNPSHEGCLLWNDPDVGIEWPLENPLLSEKDKVGKLLKELVK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaactgatagcaaaattagcggcgtcaaaattattcaacctaaggtgtttggc
gacgcgcgcggttttttcctggaaactttcgagaaaaaacgctaccaggaaatgctgaat
atcgaccttgattttgtgcaggataaccattcgcgttctgccaagggcgtgttgcgaggt
ttacatttccaaaaggtgaatcctcagggcaagctggtgcgtgtggtacggggagaagtc
tttgatgtcgccgtcgatattcgtcctgactcgccgacgttcggccagtgggaaggagtg
atcctgtcggaagagaacaagacccaattttgggtgccgccaggtttggcacatggtttt
gttgtactgtccgatattgcagatttcgaatataagtgcaccgattattataatcctagc
catgaagggtgtttgttgtggaatgatcctgatgtaggaattgaatggccacttgaaaat
ccgttgctatctgaaaaggacaaagtgggtaaactgctcaaggagttggtgaaatga
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