Serratia sp. MYb239: CLM71_11130
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Entry
CLM71_11130 CDS
T05477
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
serm
Serratia sp. MYb239
Pathway
serm00010
Glycolysis / Gluconeogenesis
serm00020
Citrate cycle (TCA cycle)
serm00620
Pyruvate metabolism
serm00650
Butanoate metabolism
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01120
Microbial metabolism in diverse environments
serm01200
Carbon metabolism
serm01210
2-Oxocarboxylic acid metabolism
Module
serm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CLM71_11130 (nifJ)
00020 Citrate cycle (TCA cycle)
CLM71_11130 (nifJ)
00620 Pyruvate metabolism
CLM71_11130 (nifJ)
00650 Butanoate metabolism
CLM71_11130 (nifJ)
Enzymes [BR:
serm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CLM71_11130 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_10
Fer4
Fer4_16
TPP_enzyme_C
Fer4_6
Fer4_9
Fer4_21
Fer4_8
Fer4_2
Fer4_17
Fer4_18
Fer4_4
YpoC
Motif
Other DBs
NCBI-ProteinID:
AVJ17648
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Position
complement(2315082..2318615)
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AA seq
1177 aa
AA seq
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MITTDGNHAVASVAYRTSEVIAIYPITPSSTMAEHADAWSGDGRQNIWGDTPRVVEMQSE
GGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCASNVQEAQDFALISQTATLNSRIPFIHFFDGFRTSHEINKIV
PLSDDTLRQMMPQAAIAAHRARALSPERPVVRGTSANPDTYFQSREAANPWYAQTYRHVS
EAMTQFAALTGRQYQPFEYYGHPDAQRVVILMGSAIGTCEEVIDALLARGEKVGMVKVRL
FRPFSAAHLLETLPASVRKIAVLDRTKEPGAPAEPLYLDVMSSLAEAFSRGERDTLPLTI
GGRYGLSSKEFGPDCALAVFAELEQERPRPRFTVGIFDDVSGLSLPLHDNPLPSHATLEA
LFYGLGSDGSVSATKNNIKIIGNGTPLFAQGYFVYDSKKAGGLTVSHLRVSERPINSAYL
VSRADFIGCHQAQFIDKYQMVERLKDGGIFLLNTPYGADEVWDRLPQEVQALLQQRQARF
YIINAAKLARECQLGARINTVMQMAFFHLTQVLPDDVALQQLQDAIARSYSSKGQEIVER
NWQALGATRQALTAIPLRSVNPASPQRPPVVADAAPDFVKTVTAAMLAGLGDALPVSAFP
PDGTWPVGTTQWEKRNIAEEVPIWRPDLCTQCNHCVAACPHSAIRAKVVPPAAMEHAPAS
LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQQPEIKAINMASRLEHLAEE
KAHYDFFLQLPEIDPAQLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRLL
IANATGCSSIYGGNLPTTPYTTNAAGRGPAWANSLFEDNAEFGLGFRLTVDQHRQRALRL
LASQADRLPAELVNGLRMDDIAPALRLKQIAELRTQLAQFDDGNARQLADDADHLLDKSI
WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG
KRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYD
LALSHDQMKQLTASGFWPLYRFDPRRTQEGKAALALDSRPPNSDLAATLLKEQRFRRLNS
LQPEVASALYQEAAQELQQKYDLLSLLAGKAEKSANE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgattacgacagatggcaaccatgccgttgcgtcggtggcttaccgcaccagcgaagtc
atcgcaatttatcctattacgcccagctccaccatggccgagcacgcggacgcctggtcc
ggtgacggccgccagaatatttggggggatacaccacgggtggtagaaatgcagtcggaa
ggcggcgcgatcgccaccgtgcacggcgccctgcagaccggcgcgctgtcgacatcgttt
acctcctcgcagggattattattgatgatcccgacgctgtataaactggccggcgaactg
acgccgtttgtgctgcacgtcgccgcgcgtacggtggccacccatgccctgtcgatcttc
ggcgaccattcggacgtgatggcggtacgccagaccggctgcgccatgctgtgcgccagc
aatgtgcaggaggcgcaggattttgccttaatctcgcagacggcaaccctcaacagccgt
attccgtttattcatttcttcgacggcttccgcacctcgcacgagatcaacaaaatcgtg
ccgctcagcgacgataccctgcggcagatgatgccgcaggcggcgatcgccgcccaccgc
gcccgggcgctgtcgccggaacgcccggtggtacgcggcacctccgccaatccggatact
tacttccagtcccgcgaggccgccaacccgtggtacgcgcaaacctatcgccacgtcagc
gaggcgatgacgcagttcgccgcgctgaccggtcggcagtatcagccgtttgaatactac
ggccaccccgatgcgcagcgggtggtgatactgatggggtcggcaatcggcacctgtgaa
gaagtgattgatgcgctgctggcgcgcggtgaaaaggtcggtatggtgaaggtgcgtctg
ttccgcccgttctcggcggcccacctgctggagacgctgccggccagcgtgcggaaaatc
gccgtgctggaccgcaccaaagaaccgggtgcgccggccgaaccgctgtatctggacgtg
atgagctcgctggccgaagccttcagccgcggtgagcgcgataccctgccgctgacgatc
ggcggccgctacggcctgtcatccaaagagttcggccctgactgtgcgctggcggtgttt
gccgaactggaacaggaacggccacgcccgcgtttcaccgtcggcatctttgatgacgtc
agcgggctgtcgctgccgctgcatgataatccgctcccctctcacgccacgctggaggcg
ctgttttacggcctcggcagtgacggctccgtctcagcgaccaagaacaatatcaaaatc
atcggcaacggaacgccgctgtttgcccagggctactttgtctacgattcgaaaaaggcc
ggcggcctgacggtgtcgcacctgcgcgtcagcgaacggccgatcaattccgcctatctg
gtcagccgcgccgattttatcggctgccaccaggcgcagtttatcgataaataccagatg
gtcgaacgtctgaaagacggcgggatttttctgctcaataccccttacggcgctgacgaa
gtgtgggaccggctgccgcaggaagtgcaggcgctgcttcagcaacgccaggcgcgcttc
tatattatcaacgcggccaaactggcgcgcgaatgccagcttggcgcgcgcatcaacacc
gtgatgcagatggcatttttccatctgacgcaggttctgccggatgacgtcgctctgcaa
cagctgcaggacgccattgcccgcagctacagcagcaaaggtcaggagatcgtcgagcgc
aactggcaggcgctgggggcaacgcgccaggcgctgaccgccattccgctgcgctccgtc
aaccccgccagcccgcaacgcccgccggtggtggccgacgccgcgccggacttcgtcaaa
accgtcacggcggcgatgctggccgggctgggagatgcactgccggtatccgccttcccg
ccggacggcacctggccggtgggcaccacgcagtgggaaaaacgcaatatcgccgaagag
gtgccgatctggcggccggatctctgtacccagtgcaaccactgcgtcgccgcctgcccg
cactcggccattcgcgccaaagtcgtgccgccggcggccatggagcacgcgccggccagc
ctgcagtcgctggatgtcaaagcgcgcgatatgcgcgggcagaaatacgtgctgcaggtg
gcgccggaagactgcaccggctgtaacctgtgcgtggaagtctgcccggccaaagatcgc
cagcagccggagatcaaggcgatcaatatggcctcgcgcctggaacatctggcggaagag
aaagcccattacgacttcttcctgcagctgccggaaatcgatccggcgcagcttgaacgc
atcgatatccgcacctcacagctgattacgccgctgttcgaatactccggcgcctgttcc
ggctgcggcgaaacgccttatatcaagctgctgacccagctatacggcgatcgcttgctg
atcgccaacgccaccggctgttcgtccatctacggcggcaacctgcccaccacgccgtac
accaccaatgccgccggccgcggccctgcctgggccaattcactgttcgaggacaacgcc
gaatttggactgggcttccgcctgacggtcgatcagcatcggcagcgcgccttgcgtctg
ctggcgtcgcaggccgatcgtctgccggcggagctggtcaacgggctgcggatggatgac
atcgcacccgccctgcggctgaagcaaatcgccgagctgcgcacccagctggcgcagttc
gatgacggtaacgcccgccagctggccgacgatgccgatcatctgctggataaatccatc
tggctgatcggcggcgacggctgggcctatgatatcggttttggcgggctggaccacgtg
ctgagcctgacggagaacgtcaacgtgctggtgctggatacccagtgttactccaacacc
ggcggccagcagtcaaaggccacgccgcttggcgcggtgaccaaattcggcgaacacggt
aaacgcaaggcgcgtaaggacctcggcgtcagcatgatgatgtacggccacgtgtatgtg
gcacagatttcgttaggtgcgcagctgaatcagacggtaaaagcgattcaggaggcggaa
gcctaccccggcccgtcgctgattatcgcctacagcccgtgtgaagagcacggctacgat
ctggcgctgagtcacgaccagatgaaacagctgaccgccagcggtttctggccgctgtac
cgcttcgatccgcgccgcacgcaggaaggcaaagcggcgctggcgctggattcacggccg
ccgaacagcgaccttgccgccaccttgctgaaggagcagcgtttccgccgcctgaacagc
ctgcagcctgaggtcgccagcgcgttgtatcaggaggccgcgcaggagctgcagcagaaa
tacgacctcctcagtctgctggccggcaaggcggagaaatcggccaacgagtaa
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