Prodigiosinella confusarubida ATCC 39006: CWC46_02720
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Entry
CWC46_02720 CDS
T05968
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq01501
beta-Lactam resistance
serq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC46_02720
01503 Cationic antimicrobial peptide (CAMP) resistance
CWC46_02720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serq02000
]
CWC46_02720
01504 Antimicrobial resistance genes [BR:
serq01504
]
CWC46_02720
Transporters [BR:
serq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CWC46_02720
Antimicrobial resistance genes [BR:
serq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWC46_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AUG98826
UniProt:
A0A2I5T2M5
LinkDB
All DBs
Position
588351..591488
Genome browser
AA seq
1045 aa
AA seq
DB search
MSKFFIERPIFAWVIAIVVMLAGVLSILDLPINQYPNIAPPAIQVSVTYPGASAETVQKT
VVQVIEQQLNGIDNLRYIESSSSSDGSASIIVTFDQGTDPDIAQVQVQNKVSLAESQLPT
EATEQGIRVAKYQSNFMMVVSLISTDGKMTDADLGNLLVSKLEDPIVRTKGVGDFLVMGA
EYAMRIWLDPAKLYKYSLVPSDISTAISQQNVQVSSGKLGGLPTVANAKFSATIIGKTRL
ETVQQFQNILLKVNSDGSQVRLKDVATVDLGPESYSISSTFDGKPSTGIALRLASGANLL
DTANAVRATLTGLESSLPEGVKIEFPYDTSPVVSASIEEVVKTLLEAIVLVFMVMLLFLQ
NLRATLVTTMVVPVVLLGTFGILFACGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
HDEKLGPKEATIKSMQQIQGALFGIAMVLSAVLVPMAFFSGSTGIIYRQFSITIVSAMAL
SVLMALIFTPALCATILKPSAGERSTTGFSGAFNRMFDRGTVNYTRGVGHVISKRSLFLL
LYLIIVGTTGYLFTRVPTTFLPDEDQATLMLQVSLPANASAERTQQVVQKVKDYLLTDEK
DIVSSVFAANGFSFAGRGQNTAMAFVRLKDWSERPKASQSVQALAGRIMQHFATLKQGQV
IALVPPAVMELGNATGFDFYLQDTNSQGHDALVAAMNQFLSMARQDPRLSMVRHNGMEDE
PQYHLVIDDERARALGLSLEDINDTLSTAWGSSYVNQFMYQGRVKDVYLQGKATSRVTPE
DLNQWYFRNSSNQMVPYSAFGSGKWGYGSPRFERFNGLSAVEIMGSPAAGYSSGDAVKAV
DEIAAKLPKGFRVQWHGLSYEEQSAGSQTTALYTLSVLMVFLCLAALYESWSIPFSVLLV
VPLGVLGTIGAVLLRGLSNDVFFQVGLLTTVGLAAKNAILIVEFAKELHERDGKDIVEAA
IDAARLRIRPIIMTSMAFVLGVLPLTISHGAGAGSQHSIGTAVAGGMITATFLAIFFVPM
FYVVVVRLFDRRRTKTPATEVQQHD
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttctttatcgaacgcccaattttcgcctgggtgatcgccattgtggtgatg
ttggcgggggtgctctctatcctcgatcttccgatcaaccagtacccaaacatcgcgccg
ccggcgattcaggtgtcggtaacctatccaggggctagcgccgagacagtacaaaaaaca
gtagtacaggtgatagagcagcagctcaacggtattgacaacctgcgctacattgaatcc
agcagcagcagcgatggcagcgctagcattattgttaccttcgatcagggcactgatccg
gatatcgcccaggtacaggtgcagaacaaggtgtccctggcggaatcgcagttgccgacc
gaagccacagaacagggtatccgggtagcgaaataccagtctaacttcatgatggtcgtt
agcttgatttccaccgacggtaaaatgactgacgctgacttaggcaaccttttggtctcc
aaactggaagatcccatcgtgcgtaccaagggggtgggcgactttctggttatgggggcg
gaatacgccatgcgtatctggctggacccggcgaaactgtataagtattcattggtacca
agcgacattagcaccgcaatttcgcagcaaaacgtccaggtgtcttcaggcaaactgggt
ggtttaccgacagtggcaaatgctaaattcagcgccaccattattggcaaaacccggctg
gaaacagtgcagcaattccaaaatatcttgctgaaggtcaacagcgacggatcacaagtg
cggctcaaggatgttgcgacggtcgatctcggaccggagagctacagcatttcttccact
tttgacggcaagccctccaccggtattgcactgcgtctcgcgagcggggctaacttgctc
gacactgctaatgcagtgcgcgctacccttactggccttgagtcttctttgccggaaggc
gtgaagattgaatttccgtacgatacctcgccagtggtcagcgcttccattgaggaagtg
gttaagacgttattggaagccatcgtgttggtgttcatggtgatgctgctgttcctgcag
aatctgcgtgccactctggtcaccaccatggtggtgccggttgtgctgctcggcactttc
ggcatactgtttgcctgcggttactctatcaacacactcaccatgttcggtatggtgctg
gcaataggcttgctggtagatgatgccatcgtggtagtggaaaacgttgaacgcgtaatg
cacgatgagaaattggggccgaaggaagccactatcaaatcgatgcagcagatccaaggg
gccttattcggcatcgccatggtgctgtcggcggtactggtgccgatggcgttcttcagc
ggctccaccggtatcatctaccgtcagttctccataaccatcgtatcggcgatggcgttg
tctgtgttgatggcgttgattttcaccccagcgctgtgtgccacgatactcaaaccatcg
gccggtgaacgatcaaccaccggcttctccggtgcttttaaccgcatgtttgatcgcggg
acagtgaattatacccgcggtgtcggccatgtcatcagtaagcgctcactgttcctacta
ctgtatttgattatcgtcgggactaccggctacctatttactcgcgtgccgacgacattt
ctacccgatgaagaccaggctaccttgatgctccaggttagccttccagccaatgcttct
gccgaacgcactcagcaagttgtgcaaaaggtcaaggactatctgctgaccgatgagaag
gatatcgtcagctcggtatttgctgccaacggctttagcttcgccggtcgcggtcagaac
acggctatggccttcgtgcgtctcaaagactggagcgagcgccctaaagccagccaaagc
gttcaggcgctggcggggcgcatcatgcaacatttcgctacgctgaaacagggtcaggtt
attgcgctcgtgccgccggcggtgatggagctcggcaacgccaccggcttcgacttttat
ctccaggatactaacagtcaggggcatgatgcactggtggccgcgatgaatcagttcctg
tcgatggcccgacaggatcctcggttgtccatggtccgccataacggtatggaggatgaa
ccgcaataccacctggtgatcgacgacgagcgagctcgtgcgcttgggctcagtctggag
gatatcaatgacacactgtccactgcctggggctccagctatgttaaccagttcatgtac
cagggacgggtcaaggacgtctatctacaaggtaaagccacttcgcgcgtgacgccggag
gatctcaatcagtggtacttccgtaacagcagcaaccagatggtgccgtactcggcgttc
ggtagtggtaaatggggctatggttcgcctcgctttgagcgcttcaacggtctgtcggcg
gtggaaatcatggggtcgcctgcggctggctacagttccggcgatgcggtgaaagcggtg
gatgaaattgccgccaaactgcctaaaggtttccgtgttcaatggcatggcctgtcctat
gaggagcaaagcgccggttcccagactaccgcgctatatactctttcggtgctgatggtg
tttttgtgtctggcagcgctgtacgagagctggtcgattccgttctcggtattgctggta
gtgccgcttggggtgctcggcaccatcggcgcggtgctgctgcgcggactgtccaatgat
gtatttttccaggtgggtctgctgaccaccgtcgggcttgcggccaagaacgctattctg
atcgtcgaatttgccaaggaattgcatgaacgggacggcaaagatatcgtcgaggccgct
attgatgctgcacgtctgcgtatccggcccatcatcatgacttcaatggcattcgtgctc
ggggtactaccgctgaccatttcccacggcgccggcgccggcagtcagcactcgatcggc
accgctgttgctggtggtatgatcaccgctaccttcctggccattttctttgtaccgatg
ttttatgttgtcgtggtgcgtctgtttgaccgccgacggaccaaaacgccggccaccgag
gtgcaacaacatgattga
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