Prodigiosinella confusarubida ATCC 39006: CWC46_18855
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Entry
CWC46_18855 CDS
T05968
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq01501
beta-Lactam resistance
serq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC46_18855
01503 Cationic antimicrobial peptide (CAMP) resistance
CWC46_18855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serq02000
]
CWC46_18855
01504 Antimicrobial resistance genes [BR:
serq01504
]
CWC46_18855
Transporters [BR:
serq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CWC46_18855
Antimicrobial resistance genes [BR:
serq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWC46_18855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Crp
Motif
Other DBs
NCBI-ProteinID:
AUH01681
UniProt:
A0A2I5TAV0
LinkDB
All DBs
Position
4145561..4148707
Genome browser
AA seq
1048 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIMVMLTGMLAIVKLPVAQYPTIAPPAVQITASYPGADAKTLQDS
VTQVIEQNMNGIDNLLYMSSSSDSSGTAQITLTFDAKTNPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVNVQKSSSSFLMVIGFISDDKNMTQQDIADYIGSTIKDPISRVMGVGDTQLFGA
QYAMRIWLDPNKLNNYQLTTSDVVSAITVQNNQIAAGQLGGAPSVPGQKLNASIIAQTRL
NSPEQFSNIILRVNKDGSQVRLKDVARVELGGESYSTVARYNGQPASGLGIKLATGANAL
DTSTAVKAEIAKLQRQFPAGMKVVYPYDTTPFVTISINEVVKTLIEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIM
TEEGLSPKEATRKSMGQIQGALVGIALVLSAVFVPMAFSGGSTGAIYRQFSVTIVSAMVL
SVLVALILTPALCATILQPVTNHGHDEKRGLFGWFNKLFGKSTNHYSDSVARILHSTGRY
VLLYMIIVVGLGLLYTRIPSSFLPEEDQGVLLTMVQLPVGSTQESTQKVLDKVNNYYLEH
EKNNVKSVFTVNGFGFAGQGQNMGLAFTSLKDWKERPGSKNKVSAIIGRAYGAFSQIKEA
LVIPFNIPAIVELGTASGFDFELIDEGGLGHEKLMAARNQLLGMIAQHPDTLIRVRPNGM
EDTPQYRIDIDQEKAEALGVSISDINSTLSTALGGSYVNDFIDRGRVKKVYVQADAPFRM
LPKDIQDWYVRGTSGQMVPFSAFSSAHWEYASPRLERYNGLPSVELVGEATPGKSTGEAM
AMMEKLASQLPKGIGFSWTGMSYQERLAGNQAPALIVVSAIVVFLCLAALYESWSIPFSV
MLVVPLGVLGAVIATSMRGLENDVYFKVGLLTTIGLSAKNAILIVEFAKDLMQKEGKGLI
EATLDASRMRLRPILMTSLAFILGVLPLAISTGAGSGAQNAVGTGVMGGMITATILAIYF
VPVFFVVVRRRFDKKKGNDAADQSIEHH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgccccatctttgcatgggtaatcgccattatggtgatg
cttaccgggatgctggcaattgttaaactgcccgttgcgcagtacccgactattgcacca
ccagcagtacagatcaccgcatcttatccaggtgctgatgctaaaacacttcaggacagt
gtaacgcaggttatcgaacagaatatgaatggcatcgataatctgctgtatatgtcttcc
agtagtgactcgtcaggtacggcgcaaattactctgacctttgatgccaaaaccaatccc
gacattgcccaggttcaggtacaaaataagttacagttagcaatgccgctgcttccccag
gaagtgcaagcgcaaggtgtgaatgttcagaaatccagcagcagctttctgatggttatc
ggttttatcagtgatgataaaaacatgactcagcaggatattgctgactacataggctcc
actattaaagacccaatcagccgtgtaatgggcgtgggtgatactcagttgttcggtgcc
caatatgccatgcgcatctggctcgatcctaacaagctgaataactatcagctcaccaca
tcagatgtggtgagcgccattacagtgcaaaacaaccagattgccgctggtcaactgggt
ggtgctccgtcagttccagggcaaaaactgaatgcatccattattgcacaaactcgcctt
aactctcctgagcagttctctaacataatccttagggtcaataaggatggctctcaggtg
cgtcttaaagatgtagcaagagtagagctggggggggaaagttacagtactgtcgcacgc
tacaatggtcagcctgcctctggtctcggtattaaacttgctactggagccaatgcgtta
gatacctccactgctgtaaaagcggaaatagcaaaactgcaacggcaattcccggcagga
atgaaggtagtttacccctatgacaccacacctttcgttacgatttcgattaacgaagta
gtaaaaaccctgatcgaagctatcgttctggtgtttttggtgatgtatctgttcctgcaa
aacttccgtgcaacgctgattcctactattgccgtgccggtagtattgttggggactttt
gcgattttgtctgcgtttggttattccataaatacactgaccatgttcgcgatggtgcta
gccatcggtctgctggtagatgacgccattgtcgtcgtggaaaacgtcgagcgaataatg
accgaagaaggtctgtcacccaaagaagcaacacgtaaatcgatggggcagattcagggg
gcattggtcggcatcgcgcttgttctgtcagctgtattcgttcctatggctttctctggt
ggttcaaccggagctatctatcgacagttttctgtaaccattgtgtcagccatggtgctt
tcagtgttagtggcgttgattctaacccctgcactttgtgccacaattctgcagccggtc
accaatcatggtcacgatgaaaaaagaggcttatttggttggttcaataagttatttgga
aaaagtaccaatcactattctgacagtgttgccaggatactgcacagtaccggccgctat
gttctcctttatatgattatcgtggtgggcttggggctactgtatacacggataccaagt
tctttcctgccagaagaagatcaaggggttctgctgaccatggtgcaattacctgtcggg
tcgacacaggaaagcacacagaaagttctcgacaaagtaaataattactatctggagcat
gaaaaaaataacgttaagtccgtttttactgttaatggctttggttttgctggtcaaggt
caaaacatgggtctggcgtttactagcctgaaagactggaaggaacgtcctggttcgaaa
aataaagttagtgctattatcggaagggcttacggcgcattttcacagattaaagaagcg
ttggtcattccttttaatatcccggctatcgttgagctaggcactgccagcggatttgac
ttcgagctcattgacgaaggtggccttggccatgaaaaattgatggcagctcgtaaccaa
ctgctagggatgatcgctcaacatcctgatacgttgatacgcgtacgtccaaatggtatg
gaagatacgccgcaatatcggattgatatcgaccaggagaaagcagaggcattgggagtc
tcgatttctgatattaactcaacgctttctaccgcattgggtggtagttacgtcaatgac
ttcattgaccgtggcagggtgaaaaaagtttatgttcaggctgatgcccctttccgtatg
ttgcccaaagatatccaggactggtatgtccgtggcacatcagggcaaatggtccctttc
tccgcattttcatcagcacattgggaatacgcctcacctcgtctggaacgctataacggc
ttaccttctgttgaactggtgggtgaagccactccaggtaagagtactggtgaagcaatg
gcaatgatggagaaattggcatcgcaattaccgaagggtattggctttagctggaccggg
atgtcttatcaggaacgtctggctggtaaccaggcgcctgcattgatcgttgtttcagcc
attgtcgtgttcttatgcctagcagcgctgtatgagagttggtctatcccattctcagtt
atgctggttgttcctcttggtgtcttgggtgcggttattgcaaccagcatgcgtggcttg
gaaaatgacgtttactttaaggtagggttgctgaccaccatcgggctttcagcgaagaat
gctattttgatcgtcgaattcgccaaagatctgatgcaaaaagaaggtaagggtttaata
gaagcaacgttggatgccagtcgtatgcgtctacgtccaattctgatgacatcactggcc
ttcattctcggtgttcttccgctcgctatcagcacgggggctggttctggcgcacagaat
gctgtcggcaccggtgtgatgggggggatgattacggcaacaatactcgccatctacttt
gtgcctgtattctttgttgtcgttcgacgccgcttcgataaaaagaaaggtaatgatgcg
gcagatcaatctatagaacaccattaa
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