Ornithinimicrobium pratense: FY030_07910
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Entry
FY030_07910 CDS
T06221
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
serw
Ornithinimicrobium pratense
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serw03019
]
FY030_07910
Enzymes [BR:
serw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FY030_07910
Messenger RNA biogenesis [BR:
serw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FY030_07910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
QFG68652
UniProt:
A0A5J6V6J3
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All DBs
Position
complement(1737026..1740031)
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AA seq
1001 aa
AA seq
DB search
MSSPAERFAAARARTAWESTAAGRFAGSLGFALDDFQLTAIKAVQEGHGVLVAAPTGAGK
TVVGEFAVALGLETGHKTFYTTPIKALSNQKYHDLVARHGAANVGLLTGDASINGEAPVV
VMTTEVLRNMMYSSSPTLTGLGFVVMDEVHYLADRWRGAVWEEVIIHLPPSVQVISLSAT
VSNAEEFGDWLTTVRGGETGLQTQVIVSEHRPVPLWQHMMVGQQLFDLFVTDGSGGGTAD
VGGTTRVNPELLQRITSAERAAQSGGWRRADEGGPRGRRGEPRGSQRGGGRDGGSGRSGG
GRGRGGRDSREVGRGGRSDRTRGYSDARGYRGDDGAVPAGGALPGGVASRTQVIERLERE
GLLPAITFIFSRAGCDAAVQQLLGRGMRLIPDQESVAVRDLVTRRVEAAAVDPRDLGVLG
YHDFVEGLSRGYAAHHAGMLPLFREIVEELFTAGRVRAVFATETLALGINMPARTVVLEK
LVKFNGETHAPVTPAEYTQLTGRAGRRGIDIEGHAVVLWRRGMDPMDVAGLASTRTYPLR
SSFRPSSNMAVNLVAQYGRERAHELLQSSFAQFQADRSVVGLTTQVRDNSTALEGYAEAM
ACDRGDFREYGRLRHELSELEKKQARRRQAERRSDIAQALEELEPGQVIQLDGGRKGSMA
VVLRSPKGRSAAPELSVITSNGSLQRLGVAGFRDVPEVIGTLRIPGHFNPRSPKARKDLA
SALRSSVHEHPFPGPSDRTRATAPQDTREGSSGHGRSNTTAQVEELRARLKAHPCHSCPD
REDHARWAARWWQLRKETDDLQRRVAHRTNAVAKTFERICDLLAGLGYLTEDGQQVTPQG
GRLRRIYTELDLVVAESIRRGAWDRLTPADLASVVSAIIHEARGDETAEPPVPSVEVAEA
LGEMAAIWREVQDAKREHDLTGDRELDTGITWMVHRWASGRGLDEVLRGGDLSAGDFVRR
AKQVIDLLGQIAQAADGDLARTARKASDAVLRGVVAADRLD
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccggccgaacgctttgctgccgcccgcgcccgcaccgcctgggagtccacc
gcggccggccgcttcgccgggtcgctgggcttcgcgctcgacgacttccagctgaccgcc
atcaaggcggtccaagaaggccacggcgtgctcgtcgcggcaccgaccggggccggcaag
acggtggtgggcgagttcgcggtcgcgttgggtctggagaccgggcacaagacgttctac
accaccccgatcaaggcgttgtcgaaccagaagtaccacgacctggtggctcggcacggg
gctgccaatgtgggtttgctgaccggcgacgcctcgatcaatggtgaggctccggtggtg
gtgatgaccaccgaggtgctgcgcaacatgatgtactcctcgtccccgaccctgaccggc
ctgggttttgtggtcatggacgaggtccactacctcgcggaccgctggcgcggcgccgtc
tgggaggaggtcatcatccacctgccgccgtcggtgcaggtcatctcgctgtcggccacg
gtgagcaacgcggaggagttcggcgactggctgaccaccgtgcgcggcggcgagaccgga
ttgcagacccaggtgatcgtctccgagcaccggccggtgccgctgtggcagcacatgatg
gtcggccagcagctcttcgacctcttcgtcaccgacggctccggtggtggcaccgcggat
gtcggtggcacgacccgggtcaaccccgagctgctgcagcgcatcacctcggctgagcgg
gccgcccagtccgggggctggcggagggccgacgaaggtggcccacggggccggcgcggc
gagccacgcgggagccaacgaggaggcggccgcgatggcggcagcggccggagcggcggg
gggcgtggccggggtggacgcgactcccgtgaggtcggtcgaggcggacgctcggaccgt
acccgcggttactccgacgcccgtggctaccgcggcgacgacggtgccgtcccggcaggc
ggggcactgcccggcggggtggccagccgcacccaggtgatcgagcgactggagcgcgaa
gggctgctgccggccatcaccttcatcttcagccgcgccggctgcgacgccgcggtccag
cagctgctcggccggggcatgcggctgatcccggaccaggagagcgtcgcggtccgcgac
ctggtcacccgccgcgtcgaggcggccgcggtcgacccgcgcgacctgggcgtgctggga
taccacgacttcgtcgagggcctctcccgcggatatgccgcgcaccacgccgggatgctg
ccgctgttccgggagatcgtcgaggagctgttcaccgccggtcgggtgcgggccgtcttc
gccaccgaaaccctggccctgggcatcaacatgccggcccgcaccgtggtgctggagaag
ctggtgaagttcaacggcgaaacccacgcgccggtgaccccggcggagtacacccagctc
accggccgggccggccgccgcggcatcgacatcgaggggcacgcagtcgtgctctggcgg
cgtgggatggacccgatggacgtcgccgggctggcctcgacccgcacctacccattgcgc
agctccttccggcccagctccaacatggccgtcaacctggtcgcccagtacggccgggaa
cgcgcccacgagctgctgcagtcctccttcgcccagttccaggccgaccggtcggtggtc
gggctgacgacgcaggtgcgggacaacagcaccgcgctggaagggtatgccgaggcgatg
gcctgcgaccgcggcgacttccgcgagtacgggcgcctgcgtcacgagctgtccgagctg
gagaagaagcaggcccgccggcgccaggccgagcgccgctcggacatcgcccaggcgctg
gaggagctggagccgggccaggtgatccagctggacgggggccggaaggggtcgatggcg
gtggtgctgcgcagccccaagggtcgctcggccgcccccgagctgagcgtcattacctcc
aacggcagcctgcaacggcttggcgtcgcgggtttccgggacgttcctgaggtgatcggc
acgctgcgcatccccggacacttcaacccccgcagccccaaggcgcgcaaggaccttgcc
tcggccctgcgcagcagcgtgcacgagcaccccttccccggcccctccgacagaacacgc
gcaacggcccctcaggacacgcgagaaggctcatcaggacacgggcgcagcaacaccacc
gcccaggtggaggagctgcgggcgcggctgaaggcacacccctgccacagctgtcccgac
cgcgaggaccatgcccggtgggcagctcgctggtggcagctgcgcaaggagaccgacgac
ctgcagcggcgggtggcgcaccgcaccaacgccgtcgcgaagaccttcgagcggatctgc
gacctgctggccggcctcggttacctgaccgaggacggccagcaggtgacgccccagggc
gggcggttgcggcgcatctacaccgagctcgacctcgtcgtcgccgagtcgatccggcgg
ggggcctgggaccgactcaccccggccgacctggcctcggtcgtctcggcgatcatccac
gaggcgcgcggcgacgagacggccgagcccccggtccccagcgtcgaggtggcggaggcc
ctgggagagatggccgcgatctggcgcgaggtgcaggacgccaagcgggagcacgacctc
actggcgaccgtgagctggacactgggatcacctggatggtgcaccgctgggcctccggc
cgcgggctcgatgaggtgctgcgcggaggcgacctgtccgccggcgacttcgtgcgacgc
gccaagcaggtcatcgacctgctcgggcagatcgcccaggcggcggacggcgacctggcc
cgcaccgcacgcaaagcctccgacgcggtcctgcgcggcgtggtggccgccgaccggctg
gactga
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