Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_20055
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Entry
CFSAN001921_20055 CDS
T02737
Name
(GenBank) transcriptional regulator
KO
K11531
lsr operon transcriptional repressor
Organism
setc
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
setc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFSAN001921_20055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setc03000
]
CFSAN001921_20055
Transcription factors [BR:
setc03000
]
Prokaryotic type
Other transcription factors
Others
CFSAN001921_20055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
Sigma70_r4
HTH_Crp_2
HTH_24
HTH_37
HTH_23
MarR
HTH_IclR
Sigma70_r4_2
Crp
Motif
Other DBs
NCBI-ProteinID:
AGQ69583
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Position
4144376..4145335
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AA seq
319 aa
AA seq
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MSDNTLVSDYGMCEEEQVARIAWFYYHDGLTQSEISERLGLTRLKVSRLLEKGHQSGIIR
VQINSRFEGCLEYENALRNHFALQNIRVLPALPDADIGLRLGIGAAHMLMESLRPQQLLA
VGFGEATMTTLKRLSGFISAQQIRLVTLSGGVGPYMTGIGQLDAACSVSIMPAPLRASSQ
EIACTLRNENSVRDVMLTAQAADAAIVGIGAINQKDQASILKSGYITQGEQLMIGRKGAV
GDILGYFFDAHGEIIPDIKIHNELIGLKLNSLSTIPTVIGVAGGEQKAEAIIAAMRGNYI
NALVTDQKTAGKIIQIIEK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatacgttggtatctgattatggaatgtgcgaagaagagcaggtggcgcgt
attgcctggttctactatcacgatggattgacgcagagtgaaatcagcgagcgtctgggg
ctaacccggctaaaggtttctcgtctgctggagaaagggcatcagtccggtattattcgc
gtacaaatcaactcccgcttcgaagggtgtcttgagtatgaaaatgccttgcgcaaccac
ttcgcattgcagaatatccgcgtgctgccggcattacccgatgccgatattggtctgcgc
ttaggaatcggcgccgcccatatgttgatggagtcactgcggccacagcaactgctggcc
gtcggctttggcgaagccacgatgaccacattaaaacgcctcagcggatttatctcggcg
caacaaatccgactggtcacgttatccggcggcgtggggccgtatatgaccggaataggc
cagcttgatgccgcttgtagcgtaagtattatgcccgcgccgctgcgcgcatcatcgcag
gaaattgcctgcacgctgcgcaatgaaaatagcgtgcgggatgtgatgctcacagcgcaa
gctgccgatgccgccatcgtggggattggggcaattaaccagaaagatcaagccagtatc
ttaaaatccggttatatcactcagggtgaacaactcatgattggccgcaaaggcgcagta
ggcgatattctgggctatttttttgatgctcatggcgaaattattccagacatcaaaatc
cataacgaattaattggcctgaagttaaattcactttccacgatcccaaccgtgattggc
gtcgccggcggcgaacaaaaagcagaagctattattgccgctatgcgcggtaactatatc
aatgcactggttaccgatcagaaaaccgcagggaaaataattcaaattattgaaaaataa
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