Suncus etruscus (white-toothed pygmy shrew): 125998073
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Entry
125998073 CDS
T09902
Symbol
RHO
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125998073 (RHO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
setr04030
]
125998073 (RHO)
G protein-coupled receptors [BR:
setr04030
]
Rhodopsin family
Vision
Opsin
125998073 (RHO)
BRITE hierarchy
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
TAS2R
Arif-1
Motif
Other DBs
NCBI-GeneID:
125998073
NCBI-ProteinID:
XP_049622266
EnsemblRapid:
ENSSRTG00000004987
LinkDB
All DBs
Position
20:complement(32559893..32565827)
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AA seq
348 aa
AA seq
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MNGTEGENFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
VTVQHKKLRTPLNYILLNLAAADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLG
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP
EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFSIPMIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYASVAFYIFTHQGSNFGPTFMTLPAFFAKSSSI
YNPVIYIMMNKQFRNCMLTTLCCGKNPFADEEASTTVSKTETSQVAPA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacagagggcgagaacttttatgtgcccttctccaacaagacaggcgtggtt
cgcagcccattcgagtacccccaatactacctggccgagccctggcagttctccatgctg
gctgcttacatgttcctactgatcgtgctgggcttccccatcaacttcctcacactctat
gtcacggtacaacacaagaagctaaggacacccctcaactacatcctgctcaacttggcc
gccgccgacctcttcatggtctttgggggtttcaccactaccctctatacctccctgcat
ggctacttcgtcttcgggcccacgggctgcaacctggagggcttcttcgccaccctggga
ggagagatcgcgctgtggtccctggtggtgctggctattgagcgctatgttgtggtgtgt
aagcccatgagcaacttccgcttcggggagaaccacgccatcatgggtgtcgccttcacc
tgggtcatggctctggcctgtgcggcaccgccccttgctggctggtccagatacatccct
gaaggcctacagtgctcatgcggaatcgactactacacactgaagcccgaggtcaacaat
gaatccttcgtcatctacatgtttgtggtccacttctccatccctatgatcgtcatcttc
ttctgctatgggcagctggtctttactgtcaaggaggctgcagctcagcagcaagagtca
gccaccacccagaaggctgagaaggaggtcacacgcatggtcatcatcatggtcatcgcc
ttccttatctgttggctgccctatgccagcgtggccttctacatcttcactcaccagggc
tccaacttcgggcccaccttcatgactctgccggcgttcttcgccaagtcctcctccatc
tacaaccctgtcatctacatcatgatgaataaacagttccggaactgcatgctgaccacc
ctctgctgtggcaagaaccccttcgccgacgaggaggcctccaccactgtctccaagaca
gagaccagtcaagtggcaccagcctaa
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integrated database retrieval system
