Suncus etruscus (white-toothed pygmy shrew): 126001113
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Entry
126001113 CDS
T09902
Symbol
CHPF
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
setr01100
Metabolic pathways
Module
setr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
126001113 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
setr01003
]
126001113 (CHPF)
Enzymes [BR:
setr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
126001113 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
126001113 (CHPF)
Glycosyltransferases [BR:
setr01003
]
Glycan extension
O-Glycan
126001113 (CHPF)
BRITE hierarchy
Motif
Pfam:
CHGN
Fringe
DNA_circ_N
Motif
Other DBs
NCBI-GeneID:
126001113
NCBI-ProteinID:
XP_049624248
EnsemblRapid:
ENSSRTG00000027814
LinkDB
All DBs
Position
2:31778395..31783632
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AA seq
775 aa
AA seq
DB search
MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQSGDPELPPRSNSNAAR
RPNSVQPGAERERPEAGTGENWEPRVLPYHPAQPGQTAKKAIRTRYISTELGIRQKLLVA
VLTSQATLSTLGVAVNRTLGHRLERVVFLTDSRGRRAPPGMTVVTLGEERPVGHLHLALR
HLLEQHGDDFDWFFLVPDATYTEAHGLARLVGHLSLATAAHLYLGRPQDFISGEPSPGRY
CHGGFGVLLSRALLQQLRPHLESCRNEIISARPDEWLGRCILDATGVGCTGHHEGVQYSY
LELGPGESVQERDPRFRSALTAYPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQNT
SRLAADGERAAAWPVGIPAPSRPASRFEVLRWDYFTEQHTFSCADGSPRCPLRGADRADV
AEVLGTALEELNRRYHPALRLRKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRALT
RRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAADERDLAPGFLEAFASAVLKPGDPAAA
LTLMLLYEPRQAQRAAAHADIFAPVKAHVAELERRFPGTRVPWLSVQTSAPSPLRLMDLL
SKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAIAGWQAFFPMHFQIFHPAVAPPQGPGPPE
LGRDTGRFDRQASSEACFYNSDYVAARGRLAAALEQEEDLLEGLDVYELFVRFSSGLHVL
RAVEPTLLQRYRAPACSARLSEDLFHRCRQSALEGLGTRTQLAMQLFEQEPGNST
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgtcgctgctgctgtcggtgctgcggcccgccgggcccgtggctgtgggcatc
tccctgggcttcaccctgagcctgctcagcgtcacctgggtggaggagccctgcggcccc
gggccaccccagtccggggatcccgagctgccccctcgcagcaacagcaatgcggcgcgt
cggcccaattcggtgcaacccggagcagagcgcgaaaggcccgaggccggcaccggggag
aattgggagccgcgggtcttgccctaccaccccgcacagcccggccagaccgccaagaag
gccatcagaacccgctacatcagcacggagctgggcatcaggcagaagttgctggtggcc
gtgctgacctcccaggccacgttatccacgctaggcgtggccgtgaaccgcacattggga
caccggctagaacgtgtggtcttcctgacggattccagaggccgccgggcacctccaggc
atgaccgtggtgaccctgggtgaggagaggcctgttggacacttgcacctggcattgcgc
cacctgctggagcagcacggagatgattttgactggttcttcctggtccccgatgccacc
tacacggaggcacatggactggcacgcctagtgggccacctcagcctggctactgcggcc
catctctatctgggccgccctcaggactttatcagcggggagccctcccctggccgctac
tgtcacgggggcttcggggtgctgctgtcccgtgctctgctgcagcagctgcgcccccac
ctggaaagctgccgcaatgaaatcatcagtgcccgccctgacgagtggctaggccgctgt
atcctggacgccaccggcgtgggttgtaccggacatcacgagggggtgcaatacagctat
ctggagctgggccctggggagtctgtgcaggagcgagaccctcgtttccgaagtgccctg
actgcctaccctgtgcgggatcctgtgcacatgtaccagctgcacaaggcttttgctcgg
gcagaactagaacgcacgtaccaggagatccaggagctgcagtgggagatccagaacact
agccgcctggctgctgatggagaacgggcagccgcctggcccgtgggtatcccggctccc
tcgcgcccggcttcccgctttgaggtgctgcgctgggactatttcacagagcagcacacc
ttctcctgcgccgatggctcgcctcgctgcccacttcgaggggcagaccgcgccgatgtg
gccgaagttctggggaccgccctggaagaactcaaccgccgctaccacccagccctgcgg
ctccgtaaacagcagctggtgaatggctaccgccgctttgacccggctcggggcatggaa
tatacgttggacttacagctggaggcgctgacccctcaaggtggtcggcgggccctgacc
cgtcgtgtgcagctgctgcggccactaagccgcgtggaaatcctgcccgtgccctatgtc
accgaagcatcccgtctcaccgtgttgctgcctctggcagccgacgagcgtgacctggca
cccggcttcctggaggccttcgcctcggctgtgttgaagccaggggaccccgcagccgcg
ctcaccctcatgttgctttatgagccccggcaggcccagcgtgctgccgcacacgctgac
atctttgcccccgtcaaggcccacgtggcagagctggaacgacgattccctggcacccgg
gtgccctggctcagtgttcagacctctgcgccctccccgttgcgcctcatggatctgctt
tccaagaagcacccattggacacactctttctgctggccgggccagacacggtcctcacc
cctgacttcctcaaccgctgccgcatgcatgccatcgcaggctggcaggcctttttcccc
atgcacttccaaatcttccacccagccgtggccccaccgcagggcccggggcccccggag
ctgggccgagacacgggtcgctttgaccgccaggcttccagcgaggcctgtttctacaac
tccgactacgtggcagcccgtgggcggctggccgccgctttggagcaggaggaggacctg
ctggagggcctagatgtctatgaactgttcgtgcgcttctcctcgggcctgcatgtcctg
cgcgctgtggagcccacgttgctgcagcgctatcgggcacccgcgtgcagcgcccggctc
agcgaggacttgttccaccgctgccgtcagagcgcactcgaaggcctgggcactcgcacc
cagctcgccatgcagctctttgagcaggaaccgggcaacagcacctga
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