Suncus etruscus (white-toothed pygmy shrew): 126003632
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Entry
126003632 CDS
T09902
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126003632 (NRDE2)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126003632 (NRDE2)
BRITE hierarchy
Motif
Pfam:
NRDE-2
TPR_14
PNPase
Motif
Other DBs
NCBI-GeneID:
126003632
NCBI-ProteinID:
XP_049625875
EnsemblRapid:
ENSSRTG00000010127
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All DBs
Position
3:complement(34483593..34519049)
Genome browser
AA seq
1167 aa
AA seq
DB search
MALFPAFAALSEAPDGGNSRKELDWLNNPSFCVGSSTSQSQTGEATAAASDRSPATRSPL
ISESADESDINKKHKQTSKKRKKEKKRKKKHQHQKKTRRRHSSSCSSGSEPDSDSGKDVF
CRSGGTDVQAPENTSLGDTAATHPSGRLVWLEDAQALTGETFRLDKKPDRANWEYKSLYR
GDIARYKRKGSSCLGLNPKKQCVSWEGTPREKKPAHKHSSERYFSRKNVSLLSIDGVALS
PPGQPPAPATFIPLAGLEEASPPVTSWLNPLGIYDQATTQWLQGQGPPAKDSQEPDTQPD
PESALLRAKVEDFNRRVRESPHDVQLWMDFVAFQDEVMRRPGLYTLQVDEEPRRRASLRM
LVEKKLAIVERALESNQGSVELQLARLHLCAELQEPGALAKEWQKLIFLHPNDAALWQKY
LRFSQSQFSTFSVSKLQGLYGKCLSTLSAVQDGSILSHPALPGTEQALFALFLQQCHFLR
QAGHTEKAVSLFQAMVDFTFFKPDSVRELPTKGQVEFFEPFWDSGEPRAGEKGARGWKAW
MHQQERGGWVIVTPDEEDDEADDDDQEIRDRTLPRWQIWLAAERSRDQRHWRPWRPEKNK
KQTEEDCEDPERQVLFDDIGQSLIRLTQPELRFQLVAAFLQFLGLPCTARPPAACFYLAL
DDGGLFDGGFSDEQPLSAPYPPFSGVGYVGRMDPLGSRRGTRGHSREGEDFIRNLLHLLL
PLFAGPERAQLCLSWLRFEVAKVLWCLHTKNKKRLKSRGKNCKKVAKSLLKEPENGSNFC
LWRLYAHLEWLLGNTDDARKVFEVALGTAAGGRALQDGGLCELGLLYAELELELGLAPEP
DSHGAATARAVQILTRLTETGPSTPSPSPVSAVPVLKARKAYEHALQACLGEAGAPASTP
HALDRLASVAKCFMLFQYLTVGIEAAVRLHDQVAAQLRGAGSPAGAGLKDRCSSSHPSPV
LEVLALMHTNLLRFHMKVSTYPLGPLRQALSEALKLFPDNQALWRAYVQVQNKSHSANKT
RRFFDAVARSTKSLEPWLFAIEAEKMRKRLVETVQRVDGREVHATLPESGLTHRIRGLFE
SAVQSEDGEQCPLLWRMYLKFLVSLGNKERSKGVFYKALQNCPWAKALYMDAVEYFPDEI
QEILDLMTEKELRVRLPLEELDLLLED
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgctattcccggcctttgcggcccttagtgaggctcccgacggtgggaattccagg
aaagagttggactggctgaataacccaagcttctgtgttggaagctccacgtctcagagc
caaactggagaggccacagccgctgcttcagacagatcgccagccaccagaagtcctctg
atatcagagtcggcggatgaaagtgacattaataaaaagcacaaacaaacaagcaagaaa
aggaagaaagagaagaagagaaagaagaagcatcagcaccagaagaaaacccggagaagg
cacagctcatcctgcagcagcgggtctgagcctgacagtgactctgggaaggatgtcttt
tgccgcagtggtggcactgacgtccaggcccccgaaaacaccagcctgggagatactgcg
gccacccatcccagtgggcgcctcgtgtggctggaggatgctcaggccctgactggagag
accttccgcctggataagaagccagaccgtgccaactgggagtacaagtccctctaccga
ggcgacatcgcaaggtacaagaggaaaggcagctcatgcctgggcctgaaccccaagaag
cagtgcgtttcctgggaggggaccccccgtgagaagaagccggcacacaagcacagcagc
gagcgctacttctctaggaagaacgtcagcctgctaagcatagatggtgtcgccctgagc
ccgcctggccagcctcccgccccggccaccttcatccctttggcaggcctggaagaggcc
tcccctcctgtgaccagctggctgaatcctctggggatctacgatcaggccaccacgcag
tggctgcagggccaggggcccccggcgaaggactctcaggagcctgacacccagcccgac
cctgagagcgccctcctcagggccaaggtggaggacttcaaccgcagggtgcgggagagc
ccgcatgacgtgcaactctggatggacttcgtggctttccaggatgaggtgatgcggcgc
cccggcctgtacacgctgcaggtggatgaggagcctcgccgtcgggcgtccctgcggatg
ctggtggagaagaagctggcgatcgtggagcgggcgctggaaagcaaccagggcagcgtg
gagctgcagctggcccgcctgcacctctgcgcagagctccaggagcccggcgcactcgcc
aaagagtggcagaagctcatcttcctgcaccccaatgacgctgccctctggcagaagtac
ctgcggttctctcagagccagttcagcaccttctccgtgtccaagctgcagggcctgtac
ggcaagtgcctgagcaccctgtcagctgtgcaagatgggagcatcctgtcacaccctgcc
ctgcctggcaccgagcaggctctctttgctctctttcttcagcagtgccacttcctgcgg
caggctggccacaccgagaaggctgtgtctctgttccaggccatggtagatttcaccttc
tttaagcccgacagcgtgcgggagctgcccaccaagggacaggtggagttctttgagccc
ttttgggacagtggcgagcccagagctggtgagaagggtgcccgaggctggaaggcatgg
atgcaccagcaggagcgtggtggctgggtgattgtgacgcctgatgaggaagatgacgag
gcggacgatgatgaccaggagattcgggaccgaactctgccccggtggcagatctggctt
gcagctgagcgctcccgggaccagagacactggcggccatggcgccctgagaagaacaag
aagcaaactgaggaggactgcgaggatccagagaggcaggtattgtttgatgacattggt
cagtctctgatccgcctgacccagcccgagctgcgcttccagctggtcgccgccttcctg
cagttcctgggcctgccttgtaccgcccgcccacctgccgcctgtttctacctggctctg
gatgatggcggcctctttgacggcggcttctccgatgagcagccgctctcggcgccatac
ccgcccttctcaggtgtcggctatgtgggccgcatggacccgttgggcagccggcggggg
acccggggccacagtcgtgagggtgaagatttcatccgtaacctcttgcaccttctgctg
ccactgtttgccggcccagagcgggcacaactctgcctttcctggctgcgctttgaggtt
gccaaggtcctctggtgcctgcacacaaagaacaagaagaggctgaagtctcgcgggaag
aactgcaagaaagtagccaagagtctcctcaaggagccagaaaacggcagcaatttctgc
ctatggcgtctctacgcgcacctagagtggctgctgggcaacacagatgatgcccgcaag
gtgtttgaggtggccctgggcacggcggccggtggccgggccctacaggacggcggcctc
tgcgaactcggtctgctgtacgctgagctggagctggagctggggctggcgccggagccc
gactcacatggggcagccacagcccgtgcggtccagatcctcaccagactcaccgagaca
gggcccagtacgccctcccccagcccggtgtctgctgtgcccgtgctgaaggcacgaaag
gcctatgagcacgcactgcaggcctgccttggggaggctggtgcccctgcgtccactccc
catgccctggaccgcctggccagtgtggccaaatgcttcatgctcttccagtacctgact
gtgggcattgaggcggccgtgaggctccacgaccaggtagcagcccagctgaggggtgcg
gggtcccctgctggtgcaggcctaaaggacaggtgcagttcctcacacccgagccctgtg
ctggaggtgctggcactgatgcacacgaacctgctgcggttccacatgaaggtcagcacg
tacccactgggccccctgcgccaggcgctctccgaggccctgaaactcttcccggacaac
caggccctttggcgggcctacgtccaggttcagaataagtcccacagtgccaacaagacc
aggagattcttcgatgccgttgccagatccaccaagtccttggagccctggctgttcgcg
attgaagctgagaagatgaggaagaggctggtggaaaccgtgcagagggtggatggcaga
gaggtccacgccacactcccagagagcggcctgacgcaccgcatcaggggccttttcgag
agcgctgtacagagcgaggatggcgagcagtgtcccctgctgtggaggatgtatctgaag
ttcctggtttccttaggaaataaggaaaggagcaaaggtgtgttctacaaggcacttcag
aactgcccatgggcgaaggcactgtacatggacgcagtggagtacttcccggatgagata
caggaaatcctagacctgatgaccgagaaggagctccgggtgcgcctgccactggaggaa
ctggatctcctgcttgaggactag
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integrated database retrieval system
