Suncus etruscus (white-toothed pygmy shrew): 126005866
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Entry
126005866 CDS
T09902
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126005866 (SUPT6H)
03036 Chromosome and associated proteins [BR:
setr03036
]
126005866 (SUPT6H)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126005866 (SUPT6H)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126005866 (SUPT6H)
BRITE hierarchy
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
HHH_3
S1
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
126005866
NCBI-ProteinID:
XP_049627135
EnsemblRapid:
ENSSRTG00000032538
LinkDB
All DBs
Position
1:165614707..165670771
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQENVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIGVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSNFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKANRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNIIPTKKGRKDVDEAHFAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGIEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYYWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSEGIYQH
VDVREEGKENAFSLGANLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggctgaggagtctgaggaagagtacaacgatgaaggc
gaagtggtgccccgagtcactaagaaatttgttgaagaggaagatgatgatgaggaggag
gaggaagagaacctagatgatcaggatgaacaaggtaacctaaaaggctttatcaatgac
gatgatgatgaagatgagggagaggaggatgagggtagtgactctggagattcagaagat
gacgttggacacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaagtaccgtcgt
gtcaaaaaaatgtcagatgatgaggatgatgatgaggaagaatacggcaaggaggaacat
gaaaaagaggctattgcagaagaaatattccaggatggagaaggggaagaagggcaggaa
aatgttgaggctcccatggctcctccagaggaagaggaagaagatgatgaagaatcagac
attgatgattttattgtggatgatgatggacaacctttgaaaaagcctaaatggaggaag
aagcttcccggatacacagatgctgcccttcaagaagctcaggagatttttggtgtggac
tttgactatgacgaatttgagaagtacaatgagtatgatgaagaactggaagaagagtat
gagtatgaagacgatgaagctgagggtgaaatccgagtacgcccgaagaagaccactaag
aaacgtgtgagtcgccggagcatttttgagatgtatgagcctagtgaactggaaagtagc
catcttacagatcaggacaatgaaattcgagccactgatctacctgagagattccagcta
cgctccattggagtcaagggagctgaagatgacgaactagaagaagaagctgactggatc
tacagaaatgcttttgccacgccaaccatttctcttcaggagagctgtgattatcttgac
cgagggcagccaaccagcaacttcagtcgaaaagggcccagcacaattcagaagatcaaa
gaggccctgggtttcatgcgaaaccagcattttgaggtgccttttattgccttctaccga
aaggagtatgtggagcctgagttgcacatcaatgacctgtggagggtatggcaatgggat
gaaaagtggacccagctgaggatccgcaaagagaatctaacacggctgtttgagaagatg
caggcttatcagtacgagcagatctctgctgacccagataaacctcttgctgatggcatc
cgggctctggacaccactgacatggagaggctcaaggatgtacagtcaatggatgaactg
aaagatgtctacaaccattttttactttattatggtcgtgacatccccaagatgcagaat
gctgccaaggccaaccgcaagaagctaaaacgtgtcagagaagagggagatgaggaaggg
gaaggtgaagaagcagaagatgaggagcagaggggtccagagctcaagcaggcttcccgc
cgagacatgtataccatctgccagagtgctggtctagatggtctagccaaaaagtttggg
cttactccagagcaatttggggaaaacctccgggatagctaccagcgacatgagacagag
cagtttcctgcagaacccttggagttggccaaggattatgtgtgcagccagtttcctacg
ccagaagctgtgctagaaggtgcccgctatatggtagccctgcagattgcccgagagccc
cttgttcggcaggtactaaggcaaactttccaggagagagccaaactaaatataattccc
accaagaaaggtagaaaggacgtggatgaggcccattttgcttattccttcaagtactta
aaaaataagcctgttaaggaactaagagatgaccagtttcttaagatttgcctggctgaa
gatgaaggactgctcaccattgatatcagcatagatatgaaggggatagaaggctatggc
aatgaccagacatattttgaagagatcaaacagttttactacagagatgagttcagccac
caagtgcaagagtggaaccggcagcgcaccatggccatcgagcgagcattgcagcaattt
ctttacgtgcagatggccaaagaactcaagaataagctgctggctgaagccaaagagtat
gtcataaaggcttgtagtcgaaagctctactattggttgagagtagctccctaccgaccg
gatcaacaagtggaggaagacgatgactttatggatgagaatcaagggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccctggtaaat
ggtgaaggagaagtgacagacttcctccgcctgccacattttaccaaacgtcgaactgca
tggagagaggaagaacgggaaaagaaggctcaagacattgaaacactgaagaaatttctt
ctgaacaaaaagcctcatgtggtgaccatagcaggagaaaacagggatgctcagatgctg
attgaagatgtgaagcgcattgtgcatgaactggaccagggtcaacagctgtcctcaatt
ggagtagaattggtagacaatgaactggccattctttatatgaacagcaagaaatcagag
gcagagtttcgagattaccctccagtgctacgacaggctgtctcactagcccggcgcatc
caggaccctctaattgagtttgcccaggtgtgcagctctgatgaagatatactatgtctc
aaattgcaccccttgcaggagcatgtggtgaaagaggagctgctcaatgccttatactgt
gaatttatcaaccgagttaatgaggttggggtcgatgtcaaccgtgccattgctcaccct
tatagccaggccttaatccagtatgtctgtggtctgggacctcggaaagggactcatctt
ctaaagatcctgaagcagaacaacaccaggcttgagagccgaacccaactggtcaccatg
tgccacatgggtcccaaagtcttcatgaactgtgctggtttcctcaagattgacacagcc
tccttgggagacagtacggactcatacattgaggtccttgatggttcacgagttcatccc
gagacctatgagtgggccaggaaaatggcagtggatgctctggaatacgatgaatcagca
gaggatgccaaccctgccggagccctggaagagatcttagaaaacccagaaagacttaag
gacctggaccttgatgcttttgcagaagaattggaaaggcagggctatggtgataagcat
atcacactgtatgacatccgagcggagctgagctgtcggtataaggacctccggacagcc
taccgttctcccaacacagaagaagtcttcaatatgttaaccaaagaaacaccagaaacc
ttctacattggaaaactcatcatctgcaatgtcactggcattgcccacaggcgcccacaa
ggtgagagctatgaccaggcaattcgtaatgatgagacagggctatggcagtgccccttc
tgtcaacaggacaatttccctgaactaagtgaggtctggaaccactttgacagcggttcg
tgtccgggccaggccattggtgtcaaaacacggctagacaacggtgttactggcttcatt
cccaccaaattcctcagtgacaaagtggtgaagcggccagaggaacgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacatcgagaagttcagtgcagatttgact
tgccgcacctcagacctcatggatcgaaacaacgaatggaaactacccaaggatacctac
tatgactttgatgcagaagcagctgaccacaaacaggaagaagacatgaagcggaagcag
cagcggaccacatacatcaagcgggtgattgcacacccgtccttccataatataaatttc
aagcaagcagaaaagatgatggaaaccatggaccagggtgatgtgatcatccgacctagt
agcaaaggggagaatcacctgactgtaacctggaaggtcagcgagggcatctaccagcat
gtagatgtgcgggaagagggcaaagaaaatgccttcagcctaggcgccaacttgtggatc
aacagtgaggaatttgaagacttagatgaaattgttgcccgctatgtccaacccatggca
tcctttgcccgggaccttctcaaccacaagtattatcaagactgcagtggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtgacagtgactccagaaggattccggtaccggggccagatc
ttcccaactgtgaatggacttttcaggtggtttaaggatcattaccaggatcctgtacca
ggcatcactcccagtagcagcagcaggacccggacccctgcttctatcaatgctacccca
gccaacatcaaccttgcagatctgacacgggcagtgaatgccctaccccagaacatgacc
tcacaaatgttcagtgccattgctgctgtgacaggccaaggacagaatcctaatgccaca
ccagcacagtgggcctccagtcagtatggctatggtggtagtggagggggcagcagcgct
taccacgtgttcccaacaccagcacagcagccagtagcaacaccactgatgaccccaagc
tactcctacacaaccccaagtcaacccatcaccacaccacagtaccaccagttacaggct
agcaccacaccacagtctgcccaggcccagcctcagccctcttccagttcccgacaacgg
cagcagcagccaaagtccaacagtcacgcagccatcgactggggcaaaatggcagagcag
tggctgcaggaaaaggaggcagagcgacggaaacagaagcagcggttaacacctcggcct
tcccccagccccatgattgaaagcacccccatgtccattgctggcgatgccaccccgctt
ctggatgagatggatcggtag
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integrated database retrieval system
