Suncus etruscus (white-toothed pygmy shrew): 126007281
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Entry
126007281 CDS
T09902
Symbol
TCOF1
Name
(RefSeq) treacle protein
KO
K14562
Treacher Collins syndrome protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126007281 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126007281 (TCOF1)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
Other 90S particles
126007281 (TCOF1)
BRITE hierarchy
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
126007281
NCBI-ProteinID:
XP_049628684
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All DBs
Position
4:complement(154189560..154229280)
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AA seq
1378 aa
AA seq
DB search
MAEARKRRELLPLVYQHLLQAGYVRAAREVKEQSGQKSFLAQPVTLLDIYTHWQLTSEVG
QKRKAEEDAALQAKKTRVSDPTSSSESSEEEEEAEAETPRTTPRLSLTNSSASRTVLSAS
LKEKAPTKKTNIMVNSVALPTSGKTVAQLLSGKSPRKSSEPSADTILVSETEEEGSMQTI
STTVQPGVTPVGQSSSSSDNTSSSSEETDIEVKPSVNAAQAKASPAPTKVSSGKKAASTP
GKAAVTPPVQLSTVSRTKKQEEDSESTEESESEGLPVATPSQKVLQPSEKTGQVRGSLGL
VKGTPGRGTMPTAPGKAGRPEEDSESSSEESDSEEDETLTTKSLPQAKPSRKSIQVQVAS
RLAKESPQKRTPAPTGRTKPAAGQAQQQQQQEDSSSDETHSRRAFSTARVPPAQAKLLGK
SPQSRENTGLPEKRAAPSVGKKEEDSESSSEESDDKGATSTAGTLAQAKTSVTTPQVRFA
PVPTKSSQQCQESSSESSDSEEEAAALTPAQAKPALKTPPTKVSPRKSTPATPPPSTVST
ARVGTPTPWRAGTLASPAVTKGTQKAEEDSSSSDESESEEETTATAVGQIQSVRKSLPTK
AALMPTKGASEQVTTPVLPRKAGPSATQTRTEMSEDSSSSEEESDSKESAKTPPQAKASV
KTPQTKTTPASSPRAALPKGATASRKTITAAAQAEQESPVKVKPTAKTPQSSALPTRSPV
CVQATSKGVVATAQVPSAPVVAEEESDSSEGEAPTLVKPPGMNSQLRTASVPAKGPPRER
TGPSSTGKAGPTATQGGRHQEDSESSSEESDSEEEATGNIIQKEDNPKTSKRKSPASVAQ
KKSPKESLESSDKLPANQVIKLPMIFVDSNRSPAGPAAASARTQAAGSPRKARASASTAR
SSSSESEDEDMIPATQCSVPAINLSMVSEPTTPTKSTPKATVSGTSLAKTSSRIMDGKNQ
QAAGTQVTKKKQTSLPLTQAALKVLSQKASEAQSPAARTPSSAGVDSAPRTHPGTTSHGT
ATQASVAPKPRKAEVPAVSQAITSSSDSDSSSDSSSENEEEKQGPQRAHSASSLGAASSR
DTIMEESSAESSEEKIQAPSQSLLSGCVTPQPTSATFHSSKANPRSDPSALGSSTLVTKD
ASNGKQRAEPQHATTVISPKAGNRESGTTSQTPRKPKKPKKGSLSPQASVAALKNDIEQR
LLSELWPLSETQVQASVVKMLAELLDQERRKALEVTKDSSGRSGLKRKLQGDQATTKVPE
KKKKKKQLEAREGGESAVTPEKNLRTAKGKPKKDRPSGDLKKKKKKKAGSGSQETKEKPE
GVQGQATVEGVSSKDKKEKRKSNKKTKDKEKKEKKKAKKASTKDSSLQLQKKKKKKVQ
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagaggcgggagctgctgccgctcgtctaccagcatctcctgcag
gccggctacgtgcgcgcggcgcgggaagtgaaggagcagagcggccagaaaagtttcctg
gcacagcctgtaacccttctggacatctacacacactggcaactaacctcagaagtgggc
cagaagcgcaaggccgaagaggatgcggcactccaggccaagaagacccgggtatcagac
cccaccagcagctcggagagctccgaagaggaagaggaagcagaagcagagacacccaga
accaccccaagattatcactgaccaactcttcagcctcacggacagttttgtctgcaagc
ttgaaagaaaaggccccgaccaagaaaaccaacataatggtgaactccgtggcacttcct
acatctggaaagacagtggcccagcttctgtctgggaagtcccctagaaagtcatcagag
ccatcagcagacaccatcttggtctcagaaactgaggaggagggcagcatgcaaactatt
agcaccactgtccagcccggagtgacaccagtgggccagtccagcagctccagtgacaac
acttccagttccagcgaagaaacagacatagaggtgaaaccttcagtgaatgctgcccag
gccaaagcctctccagcgcctaccaaggtgtcttcagggaaaaaggcagcttctacccct
gggaaggctgctgtgacacccccagtccagctgagcacagtcagcaggacgaaaaagcaa
gaagaggactcagagagtactgaggagtctgagagtgaggggctccctgtggcaacaccc
agccagaaggtcttacagccctcagagaagactggccaggttcgaggttccttgggtctt
gtcaaggggacccctggtagaggaaccatgccgacagcccctgggaaggcagggaggcca
gaggaggactcggagagcagcagcgaggagtcagacagtgaggaggatgagactctgact
accaagtccctgcctcaggcaaagccttcgaggaagtccatccaggtccaagttgcctcg
cgcctcgccaaggagtctcctcaaaaaaggactcctgcacccacaggcaggaccaaacct
gcagctggccaggcccagcagcagcagcaacaggaagatagcagcagtgatgagacgcac
agcaggcgagctttctctacggccagagtgccccctgctcaggcaaagcttttgggcaaa
agtccccagagcagagagaacacggggctcccagagaagagagcagcaccctctgtaggg
aaaaaggaggaagattctgagagcagcagcgaggagtcagatgacaagggggccacttcc
acagctgggaccttggcccaggccaagacctcggtgacaacccctcaggtcagatttgcc
cccgtccccaccaagagttctcagcagtgccaagaaagcagttcggagtcctcggacagt
gaggaggaagctgccgctctgactccagctcaggcaaaaccagctctgaaaacaccccca
accaaggtgtctccaagaaagagcacccctgccacccctccacccagcacagtcagcaca
gccagagtaggcactcccacgccctggagagcgggaactttggcctccccagctgtgacc
aagggcacccaaaaggcagaggaagactcttcaagcagtgacgaatctgagagtgaggag
gagacaactgctacagcggtgggacagatacaatctgtgagaaaaagcctgcccacaaaa
gctgctttgatgccgaccaaaggagcctcggagcaggtgacaacccctgtactcccacgg
aaggctgggccttcagcaacccagaccaggactgagatgtccgaagactcgtcaagcagt
gaagaggaatcggacagtaaagaatcagctaagactccaccccaggcaaaggcttcggta
aaaaccccacagacaaaaactaccccagcttcatctcccagagcagctttacctaaaggg
gccacagcgtccagaaaaacaatcactgcagccgcccaggccgagcaggagtccccagtc
aaggtgaaacccacagccaaaactcctcaaagcagtgctctccccacacgaagcccggtg
tgtgtgcaggctaccagcaagggagtagtggccacagcacaagtcccatcagcacctgtt
gtagctgaggaggagtcagacagcagtgagggagaggcacctactttggtgaagccccca
ggaatgaattcccagctcagaactgcttcagtccctgccaaggggccccccagagaaagg
actggcccatcatccactggaaaggcaggccccacagccactcagggagggaggcaccag
gaggactcggaaagcagcagtgaagagtctgacagtgaggaggaggccacagggaacatc
atccagaaggaggataaccccaaaacttccaaaaggaagagcccggcctcagtggcccaa
aagaagagcccaaaggagtccttggagagcagcgataagttgccagcaaaccaggtgatt
aaactccctatgatttttgtcgactctaatcgtagtccagctggcccagcagctgcctct
gcacgaacccaggctgcaggcagcccaaggaaggcccgggcctcggcgagcacggccagg
agctcctcctcagagagcgaggatgaggatatgatccctgccacgcagtgctccgttcct
gccattaacctcagtatggtgagtgagcccacgacccccacaaagagcacccccaaagcc
actgtttctgggacgagcctcgccaagacctccagccggatcatggatggcaagaaccag
caggcagcaggcacgcaggtgacaaagaagaagcaaaccagcctcccattgacccaagct
gccctcaaggttctttcccaaaaagccagtgaggcccagtctcctgctgccaggacccca
tcttcagctggggtggacagtgctccgaggacccaccctgggaccacatctcatggtacc
gccacacaggcctctgtcgctcccaagcccagaaaagctgaggttcctgcagtctctcag
gctatcacttcctccagtgacagtgatagcagcagtgacagttcttcagagaacgaggag
gaaaagcaggggccccaaagggcccattcggcctccagcctgggtgcggcttcaagcagg
gatacaatcatggaggagtcctcagcagaatccagtgaggaaaagatacaagcgccctcc
cagtctctcctctcaggttgtgtgacccctcagccgacttcagccactttccattcttcc
aaggccaatcccaggtcagaccccagtgccttgggttcttctactctggtcaccaaagat
gcttccaatggcaagcagagggcagagccccaacacgcaacaactgtcatctcacctaaa
gcaggcaatagagagtcaggcaccacctctcagacaccccggaagcccaagaagcccaag
aagggatctttgagcccccaggcctcagtggcagctctgaagaatgatattgaacagcgg
ctcttgagtgaactgtggcccctgagtgagacacaagtgcaggcctccgtggtgaagatg
ttggctgagcttctggaccaggagagaaggaaggccctggaggttaccaaggacagtagt
ggccgctcgggcctcaaacggaagctgcagggggaccaggcaactaccaaagtccccgag
aagaagaagaagaagaaacagctggaagccagggaaggtggggagagtgctgtcactcca
gaaaagaacctcaggactgcaaaggggaagcccaagaaagacagaccgagtggtgacttg
aagaagaagaaaaagaagaaggcaggttccggctctcaggagaccaaggagaagccagaa
ggcgtgcaggggcaggcaactgtggaaggtgtcagctcaaaggacaagaaggagaagagg
aagtccaacaaaaaaacaaaagacaaggaaaaaaaggaaaagaagaaagcaaaaaaggcc
tcaaccaaagattccagtttacaattgcagaaaaaaaagaagaaaaaggtacagtga
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