Suncus etruscus (white-toothed pygmy shrew): 126027715
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Entry
126027715 CDS
T09902
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126027715 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126027715 (DDX46)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126027715 (DDX46)
Spliceosome [BR:
setr03041
]
Complex A
U2 snRNP components
U2 related factors
126027715 (DDX46)
Complex B
126027715 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
126027715
NCBI-ProteinID:
XP_049642673
EnsemblRapid:
ENSSRTG00000029967
LinkDB
All DBs
Position
14:complement(30724947..30778899)
Genome browser
AA seq
1033 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRSDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTETRRSR
SKEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAM
ENIGELKKEIEEMKQGKKWSLEDDDDDEEDPAEAEKEGNEMEDEELDPLDAYMEEVKEEV
KKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDADKKKGELMENDQDAMEYSSEEE
EVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEG
ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTG
SGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCV
YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGF
EPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIV
IEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRD
SIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYA
YTFITEDQARYAGDIIKALELSGTTVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFK
FDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVP
APTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAE
QLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRI
SEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQN
SYQPTNKGRYKVL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactaccggaagcgatcagcatctcgaggccgctctggaagt
cggtctagaagtcgttcaccctcagataaaagaagtaaacgcagtgatgacagaaggtca
agaagcagagatagagatcgaaggagagagaggtcacgaagcagggataaaagaagatct
cggtcaagggaccgaaaacgcttgagacgttccagaagcagagaaagagataggagtcgg
gaacgaagaagatctcgaagtcgagacagaaggagatcaaggagtagaagtcgtggccgg
cgatcgcgatcctctagtcctggcaataaaagcaagaaaactgagacgagaagatctagg
tccaaagagaaaacagatagtggagaaagttctaaagagaagaaaaaagacaaagatgac
aaggaggatgaaaaagaaaaagatgctggcaactttgatcagaataagctagaagaagaa
atgagaaagcgaaaagaaagagttgaaaaatggcgagaagagcagcgtaaaaaggccatg
gaaaatatcggagaactgaaaaaggagattgaagaaatgaaacaagggaagaaatggagt
ttagaagatgatgatgatgatgaagaagatcctgcagaagctgaaaaggaaggaaatgaa
atggaggatgaagaattagatcctttagatgcttacatggaagaagtgaaagaagaagta
aaaaagttcaacatgagaagtgtaaaaggtggtggaggaaatgagaagaagtctggacca
acagtcaccaaagttgtcactgttgtgacaaccaaaaaagcagttgtagatgctgataag
aagaaaggtgaattgatggaaaatgaccaagatgccatggagtattcttcagaggaggaa
gaagttgatcttcaaacagcccttacaggctatcagacaaaacagagaaagcttttagaa
ccagttgatcatggaaaaattgaatatgaaccatttagaaaaaatttttatgttgaagtt
ccagaattggccaaaatgtctcaagaagaagtgaatgtatttcggttggaaatggagggc
attacagttaagggaaaaggttgtcccaaaccaattaaatcttgggttcaatgtggaatt
tccatgaagattttaaattctctcaagaagcatggttatgaaaaacccacacccatccaa
acccaagcaattcctgctataatgtctggaagggatttgattggcattgcaaagacagga
agcgggaagactattgcttttcttttgcctatgtttagacacattatggatcagaggtca
ttagaagaaggagaaggacctatagctgtcatcatgactccaactcgagaactggcttta
caaattactaaagaatgtaagaagttttcgaagacattgggacttcgcgtagtttgtgtc
tatggaggaacaggaattagtgaacagattgctgagctgaaaagaggtgctgaaattatt
gtttgcacacctggtcgaatgattgacatgctagcagctaatagtggtcgagtcacaaat
cttcgaagagtgacatatgttgttttagatgaagcagacagaatgtttgatatgggtttt
gagcctcaggtcatgcgcattgtggacaatgttcgtcctgatcgacagacagttatgttt
tctgctactttccccagagcaatggaggcattggcccgaaggatcctgagtaaacccatt
gaagttcaggttggaggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtg
atagaagaggaaaagaaattcttgaagttacttgaacttctaggtcattatcaagaatct
ggttctgtcattatatttgttgataagcaagaacatgctgatggtcttctgaaggattta
atgagagcatcctatccttgcatgtctcttcatggaggtattgatcagtatgacagagat
agcatcataaatgatttcaagaatggaacctgcaaacttcttgtagctacttctgtcgct
gctcgaggtctcgatgtgaagcatctgattcttgtagtgaattacagttgtcccaatcat
tatgaggattatgtacacagagcagggcgaactggaagagctggcaacaaaggttatgca
tacacttttatcacagaagatcaagctcggtatgctggtgacataattaaagctctcgaa
ttatcagggactacagtgcctcctgatctagagaaactttggagtgatttcaaagaccag
caaaaagctgaagggaaaataatcaaaaagagtagtggtttctctggtaagggattcaag
tttgatgaaacagaacaagctttggctaatgagagaaagaagttacaaaaagcagctctt
ggtctgcaagattcagatgatgaagatgctgcagttgatattgacgaacaaattgaaagc
atgtttaattcaaagaagagagtaaaagatatggctgctcctggaacatctagtgttcct
gctccaactgcaggaaatgctgagaaattagaaattgctaagaggttggctcttagaatc
aatgcccagaagaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaat
gcaattctcagaggtggcaccattttggctcctactgtatctgcaaaaaccattgcagaa
cagcttgccgaaaagatcaatgccaagctcaattatgtacctttggagaaacaagaagaa
gagagacaagatggtgggcaaaatgaatcttttaagagatatgaggaagaactagagatc
aatgacttcccacagactgctaggtggaaagttacttctaaagaagctctacagagaatt
agtgaatactctgaggctgcaattacaatcagaggaacgtatttcccacctggaaaagaa
cccaaggaaggagagaggaaaatctacttggctattgaaagtgccaatgaactggctgtg
caaaaagcaaaggcagaaatcaccaggctcataaaagaagaactaatccggttgcaaaat
tcatatcaaccaacaaataaaggaagatacaaagtcctgtag
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