Suncus etruscus (white-toothed pygmy shrew): 126032283
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Entry
126032283 CDS
T09902
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126032283
03015 mRNA surveillance pathway
126032283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126032283
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126032283
mRNA cycle factors
P-body specific factors
126032283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
126032283
NCBI-ProteinID:
XP_049645904
LinkDB
All DBs
Position
16:45958584..45960027
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AA seq
479 aa
AA seq
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MKEERDYKPREKRVTLLTPQGAASNIAGASADYSKGDDKQDRSREKKKALSKVVIRRLPP
TLTKDQLLEHLQPLPEHDYFEFFSNDTSLYPHMYSRAYINFKNQEDILLFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKAGTIDDDPEYRKFLETYAADNEKMASTLET
LLEEIEAKNRELTAKRTTPLLSFLKNKQRMREEKREERRRRELERKRLREEERHKWKEEE
KRQRKEIEKLKKVERIPEREKIKEEPKIKLLKKPEKGDDKEVEKREKAKKLDKENLSDQR
AGGPVCTLAKRPELELQEEKPKRFEEDLSRDYRDRDHDRNRDRDFERDQERILREREGLR
RQEEERRRQKERYDKEKKALAFKRKEEELKKEKEALGAKSKKPETPEPVGSAEKGEKKDE
VVKRDRIRNKDRPAMQLYQPGARSRSRLLPPQDTNKPGDAGVDRKQESGISHRKKGGEE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagcgggattacaaacccagggagaagcgggtaaccctcctaacgccccaa
ggggccgcgagcaatatcgctggggcttcagccgactacagcaagggtgatgataagcag
gaccggagccgggaaaagaaaaaagcgctgagcaaggtagtgattcgcaggttacctccc
acactgaccaaggatcaacttctggaacatcttcagcctctgcctgaacatgattatttt
gaatttttctcgaatgatactagtttgtaccctcatatgtattcgagagcgtacatcaac
tttaagaaccaagaagatattctcttgttcagggatcgctttgatggctacgtattcctt
gacaataaaggccaggaatatcctgctatcgtcgaatttgcgccttttcaaaaagctgca
aaaaagaagacgaagaaaagagataccaaagctgggacgatcgatgatgacccagaatat
agaaaatttttggagacctatgctgcggataatgagaagatggcatctactctagagact
ctactcgaggaaatcgaagccaaaaatagagaattaacagctaaaaggacaaccccactg
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagagaggaggagg
agagagctggagcgcaaaaggctccgagaagaagagagacacaagtggaaagaagaagaa
aagcgccaaaggaaggagatagaaaagctcaagaaagtagaacggattccagagagggag
aagataaaggaagaaccaaagattaagttgctcaagaagccagaaaaaggggacgacaag
gaagtggagaaaagagagaaggccaagaagttggacaaagagaacctgagtgaccaaagg
gccggcgggcctgtttgtaccttggccaaacgccctgagctggagttacaagaggaaaag
cctaagagattcgaagaggacttgagcagagattaccgagaccgtgaccatgaccgtaac
cgtgatcgggattttgagcgtgaccaggagcgcatccttcgggaacgagaagggctccga
cgacaggaggaggagcgccgaaggcagaaggagcgctacgacaaggagaagaaggccttg
gcctttaaaaggaaggaagaggagctgaagaaagaaaaggaagctctgggagccaaatcc
aagaagcccgaaacacccgaaccagtgggcagtgcagaaaaaggggagaagaaagacgaa
gtggttaagagagatcgcataagaaacaaggatcgccctgccatgcagttgtaccagcca
ggagctcgaagccgcagtcgtcttcttcctccccaggacaccaacaagcccggagatgca
ggagtagacagaaagcaggaaagtggtattagccatagaaaaaagggaggagaggagtga
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