Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_06855
Help
Entry
STU288_06855 CDS
T02639
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00521
Streptomycin biosynthesis
setu00523
Polyketide sugar unit biosynthesis
setu00541
O-Antigen nucleotide sugar biosynthesis
setu01100
Metabolic pathways
setu01110
Biosynthesis of secondary metabolites
setu01250
Biosynthesis of nucleotide sugars
Module
setu_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
STU288_06855
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STU288_06855
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STU288_06855
Enzymes [BR:
setu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STU288_06855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGK08979
LinkDB
All DBs
Position
complement(1388558..1389106)
Genome browser
AA seq
182 aa
AA seq
DB search
MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRG
LHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHG
FVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKDAAAPLLDQALL
TE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgattaaaacagcaataccagatgtcttgatcttagagcctaaagtttttggc
gatgagaggggattcttttttgaaagttataaccagcagacctttgaagagttgattgga
cgtaaagttacatttgttcaagataatcattcaaaatccaaaaagaacgtactcagaggg
ctacattttcagagaggagaaaatgcacaggggaagttagttcgttgtgctgtcggtgag
gtttttgatgttgcggtcgatatccgaaaagaatcgcctacttttggtcaatgggttggt
gtaaatctgtctgctgagaataagcgacagctttggattccagaaggttttgctcatggt
tttgttactcttagtgagtatgcagagtttctgtacaaagcaactaattattactcacct
tcatcggaaggtagcattctatggaatgatgaggcaataggtattgaatggcctttttct
cagctgcctgagctttcagcaaaagatgctgcagcacctttactggatcaagccttgtta
acagagtaa
DBGET
integrated database retrieval system