KEGG   Saccharomyces eubayanus: DI49_0914
Entry
DI49_0914         CDS       T08138                                 
Name
(RefSeq) CDC9-like protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
seub  Saccharomyces eubayanus
Pathway
seub03030  DNA replication
seub03410  Base excision repair
seub03420  Nucleotide excision repair
seub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DI49_0914
   03410 Base excision repair
    DI49_0914
   03420 Nucleotide excision repair
    DI49_0914
   03430 Mismatch repair
    DI49_0914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seub03032]
    DI49_0914
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_0914
Enzymes [BR:seub01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DI49_0914
    6.5.1.6  DNA ligase (ATP or NAD+)
     DI49_0914
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DI49_0914
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DI49_0914
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DI49_0914
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DI49_0914
   NER (nucleotide excision repair)
    Other NER factors
     DI49_0914
   MMR (mismatch excision repair)
    Other MMR factors
     DI49_0914
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Phasin
Other DBs
NCBI-GeneID: 28930052
NCBI-ProteinID: XP_018222930
UniProt: A0A0L8RLL9
LinkDB
Position
IV:complement(155308..157575)
AA seq 755 aa
MRRSLAGLTFTHLRPSSPRSLLFMSSSLPSSAGKKPKQATLARFFTSMKNKPPGGSSSPE
KATKHKLESGINGINSEGASAIKKLKHVSAVQTPVEPSDMSSNNSSLPSSAPSSSGVDAS
QKSRELTPKVEEEQGPIENDHYSSNIPYSEVCEVFNEIEATSSRLEIIRICSDFFTKIMK
QSSKNLIPTTYLFINRLGPDYEPGLELGLGENLLMKTISESCGKSMSQIKLKYKEIGDLG
EIAMGARNVQPTMFKPKPLTVGEVFKSLRSIAKTQGKDSQLRKVKLIKRMLTACQGVEAK
FLIRSLESKLRIGLAEKTVLISLSKALLLHGGNEESSRVDDIPMDALESAQQKIRDAFCQ
VPNYELVINSCLEHGIMNLDQFCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKY
DGERAQVHLLDDGTMRIYSRNGENMTERYPEIRITDFIQDIDATKNLILDCEAVAWDKEQ
GKILPFQVLSTRKRKDVELSDIKVKVCLFAFDILCHNGERLINKSLRERRDCLTKVTKVV
PGEFQYATQIVTDNLDELQKFLDESVNQSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKD
YLEGVGDSLDLCVIGAYYGRGKRTGTYGGFLLGCYNQDSGEFETCCKIGTGFSDEMLQQL
HERLTPTIIDGPKATFVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSL
RFPRFLRIREDKGVEDATSSEQIVELYENQSHMQN
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgcgcagatcactggctggcctcactttcacacatttacgtccctcgagtccaagatcg
ctgctattcatgtcatcctcattaccttcctctgccggtaagaaaccaaaacaggctact
ttggctaggttcttcacgtccatgaagaataagccgccaggaggctcttcgtctcctgag
aaggccaccaaacacaagcttgaaagtggcataaacgggattaatagtgaaggagcgtct
gctataaagaaactgaagcatgtgtcggccgtgcaaacgccggtggagccgtctgatatg
agtagcaacaactcttctctaccgtcatctgctccctcttctagcggtgttgatgcgtcg
caaaaatctcgggagctcactcccaaggtcgaagaagaacagggcccgattgagaatgac
cactactcatccaatatcccctattccgaagtctgtgaagtcttcaatgagatcgaagcc
acctcttctcggttggaaattattaggatatgttccgacttctttacaaagataatgaag
caatcatctaagaatttgatacctaccacatatctttttatcaataggttgggccccgat
tatgagcctggtttggaattgggccttggtgaaaatcttttaatgaaaacaatcagtgaa
tcctgcggcaaatcaatgagccaaattaaactaaaatacaaggaaatcggagatttgggt
gaaatagctatgggcgcgagaaacgttcaacccacaatgtttaagccgaaacccttaact
gtaggcgaggtctttaaaagtctacgaagtattgcaaagacccagggtaaagattcgcaa
ctgagaaaagtcaagcttatcaaaagaatgttaaccgcatgccagggtgtagaggctaag
tttttgattagatccttagaatcaaaactaagaataggtcttgctgaaaaaacagtgttg
atatctttatccaaagcacttttacttcatggtggaaatgaggaaagttctcgtgttgat
gatatccccatggacgccttggaaagtgctcaacaaaaaatcagagatgcattttgtcaa
gtaccaaattatgagctcgtcatcaattcatgcttggaacatggtatcatgaatctggac
caattttgtactttaagaccaggaattccattgaaaccgatgttggctaaacccacaaag
gcaatcaatgaagttttagacagattccaaggtgaaacttttacgtcggaatacaaatac
gacggggaaagggcccaagtacatttgttagatgatggtacgatgagaatctactccaga
aacggtgaaaatatgactgaaagatatccagaaatcagaatcacagatttcattcaagat
atagatgccaccaagaatttgatcctggactgtgaagctgtagcttgggacaaagaacaa
gggaagattctaccattccaagttctaagtacaaggaaacgtaaagacgtggaattgagt
gatatcaaagtaaaagtctgtctctttgcatttgacatcctttgccacaacggtgagaga
ttgatcaataaatctttgcgagaaagaagagactgcttaactaaagttacgaaggttgtt
cctggggaattccaatacgccactcaaatagtaacggataatctcgatgaactgcagaag
tttctcgacgaatccgtcaatcaatcatgcgaaggtttaatggtcaaaatgcttgaaggt
cctgaatcacattatgaaccaagcaaaagatcaagaaattggctraagttgaaaaaagat
tacttagaaggtgtcggagattccttggatctttgcgtcataggggcatactatggcaga
ggtaaaagaacaggcacgtatggcgggttccttttaggctgttacaatcaagattcggga
gaatttgaaacctgttgcaaaatcgggacaggattttctgatgaaatgttgcagcaactt
catgaaagattaacccctacgataatcgatggaccaaaggccacgtttgtttttgattcc
agtgctgaaccagacgtatggtttgaacccacgactctgtttgaagtactgacggcagat
ctttccctatcacccatttataaagccgggagcgcaactttcgataaaggtgtttcgtta
agatttcctaggtttctacgtataagagaagataagggtgtcgaagatgccacttcttca
gaacaaattgtggaattgtacgaaaaccagtctcatatgcaaaattag

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