Saccharomyces eubayanus: DI49_1260
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Entry
DI49_1260 CDS
T08138
Name
(RefSeq) PRP5-like protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_1260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
seub03041
]
DI49_1260
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DI49_1260
Spliceosome [BR:
seub03041
]
Complex A
U2 snRNP components
U2 related factors
DI49_1260
Complex B
DI49_1260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
28930397
NCBI-ProteinID:
XP_018223263
UniProt:
A0A0L8RN08
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Position
IV:862261..864813
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AA seq
850 aa
AA seq
DB search
MKSIGSTENRERESLLEERRKKLAKWKQKKAQFDAQKENQTLNSNIVTNSSEIKQNAGKF
AARQEKVKEKLRKRKIELEKPHQRLLDKPSKKKSKKNKKKDKVSFEFSDNEEAVAVNAFS
MNEDFKDVAEHDDEKDPLDEFMTSLKAEETSRNKILYDSGVILDADDQLVELEEADDENI
NDSTDNSNISKIAKLKAKKRVKQINYLPEELEPFQKNFYVESEAISSMTETEVEELRLSL
DNITIKGTGCPKPVTKWTHLGLSTDTMNLITNRLRFDSLTPIQSQALPAIMSGRDVIGIS
KTGSGKTISYLLPLLRQVKAQRPLSKHETGPLGLILAPTRELALQIHEEVNKFTETDASI
RSVCCTGGSEMKRQITDLKRGAEIVVATPGRFIDILTLNDGKLLSTKRITFVIMDEADRL
FDLGFEPQITQIMKTVRPDKQFVLFSATFPNKLRSFAVRVLRSPISITINSKGLVNENVK
QKFKICHSEDEKFDNLIQIVRKRNEFFDEAQTEVDGDTSDLEEVDSKAIIFVSSQQICDL
ISKKLTNVGVVTYAIHAGKPYQERVMNLEKFKREKNSILLCTEVLSRGLNVPEVSLVIIY
NSVKTFAQYVHTTGRTARGSRSGIAITLLLNDELSGAYILSKAMRDDELKACDPLQTKEL
YEMSEKFESGMKKGKFRLSKGFGGKGLENIKSKREEAQIKELEPKKGQKNNDQLENKSDH
SSNEHANEAESSAHIPKLEYQIFKEPTLEGSIIFYAKVYINDLPQIVRWEATKNTTLLFI
KHETGCSITNKGRFYPEGKEPKNDTDEPKLYLLIEGQDEKDIQLSIELLEQKVKEGVIKA
ANISLKSTKY
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtattggttcgacagaaaatagagagagggagtctctactcgaagaaaggaga
aaaaaactagcaaaatggaaacaaaagaaagcacaatttgatgctcagaaagagaatcaa
actctaaacagtaacattgttactaacagttcagagattaagcagaatgctggaaagttt
gccgcaaggcaggaaaaggtgaaagaaaagcttcgaaaaaggaaaattgaactagagaaa
cctcatcagcgtctattggataaaccttcaaagaaaaagtctaagaaaaacaagaaaaag
gacaaggtgtctttcgaattcagtgataatgaagaagcagtagcagtgaatgctttctca
atgaacgaagactttaaagacgtagcggagcacgacgatgagaaggatccattagatgag
tttatgacatcattgaaagctgaagagactagccgtaataagatcttgtacgattcagga
gtcatcctggacgcagatgatcaactggttgaattggaagaagctgatgacgaaaatatt
aacgacagcaccgataactctaacatatctaaaattgccaaactaaaagcgaaaaaacgt
gtaaagcaaattaattatctgccggaagaactggagccatttcaaaagaacttctatgta
gaatctgaagcaatctcctcgatgactgagacggaagtagaagagctcagactgagcctg
gacaacatcacaataaagggaacagggtgtccaaagccggtaacgaagtggacacatttg
gggctatcaacagatactatgaatttaattaccaacaggttacgatttgactctttaacc
ccaattcaatcccaggcgctgccagccatcatgtcaggtcgtgatgtaattggaatatct
aagacagggtccggtaaaaccatatcttatcttttaccattattaagacaagtgaaagct
caacggccattatctaagcatgaaacagggcctttgggtttgattttggcaccaacacgg
gagttagctctacagatacatgaagaagttaacaagttcacagaaacagacgcaagcata
agatcggtatgctgtacgggtggctctgagatgaagaggcagatcactgatctcaaaaga
ggtgctgaaatagttgttgctacgcctggaagatttattgatatactaactttaaacgac
ggaaaattgctaagtaccaaaagaataacatttgtaataatggacgaagcagacagatta
ttcgatttaggctttgagcctcaaatcacccaaatcatgaaaacagttcggccggataaa
caatttgttttgtttagtgcgactttcccaaataagttacgtagttttgcggtcagagtt
ttgcgatctccaatatccattacaattaattcgaaaggtttggttaacgaaaacgttaag
caaaagtttaaaatatgtcattcagaagatgaaaaatttgataacctgatacaaattgtt
cgtaagcgcaacgaattttttgatgaggctcaaaccgaagttgacggagacacgagtgat
ctcgaagaagttgattctaaagctattatatttgtgtcaagccaacagatttgcgattta
atttccaaaaaactgacaaacgtgggcgttgtgacctacgctattcatgcaggcaaaccg
tatcaagaaagagtcatgaatttggaaaaattcaagagagagaaaaatagcattctgctt
tgtacagaagttctttcaagaggcctgaatgtgccggaagtgtcactggttatcatttat
aactccgttaagacatttgcgcaatatgttcacactaccggaagaaccgccaggggtagt
cgttcgggtattgccataaccctcctgctaaatgatgagttgtctggggcttatatccta
agcaaagctatgcgtgatgatgaactgaaagcttgtgatcctttgcaaaccaaggaacta
tatgaaatgagtgagaagtttgaatcgggtatgaaaaagggtaaatttaggttgtcgaaa
ggatttgggggcaaaggacttgaaaatatcaaaagcaaaagggaagaagcccaaatcaag
gaattggaacccaagaaaggtcaaaagaacaacgatcaattggagaataaaagcgaccat
tcatctaatgagcacgctaatgaagcggaatcatctgcgcatattccaaaattggaatat
caaatcttcaaagagcctacattagagggatccattatcttttatgccaaagtttatatt
aacgacctgccccaaattgtaagatgggaagctacaaagaacacgacactgttatttata
aagcacgaaactgggtgtagtataactaacaagggcagattttatccggaaggaaaggaa
ccgaaaaatgacacggatgaacccaaattatacttgttgatcgaaggtcaagatgagaag
gacatacaattgagtatcgaattactagaacaaaaagtaaaggaaggggtcataaaggct
gcaaatatatccttgaaaagtacaaagtattga
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