KEGG   Saccharomyces eubayanus: DI49_2030
Entry
DI49_2030         CDS       T08138                                 
Name
(RefSeq) UPF3-like protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
seub  Saccharomyces eubayanus
Pathway
seub03013  Nucleocytoplasmic transport
seub03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DI49_2030
   03015 mRNA surveillance pathway
    DI49_2030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_2030
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     DI49_2030
   mRNA cycle factors
    P-body specific factors
     DI49_2030
SSDB
Motif
Pfam: Smg4_UPF3 DUF4278
Other DBs
NCBI-GeneID: 28931167
NCBI-ProteinID: XP_018222283
UniProt: A0A0L8RJE8
LinkDB
Position
VII:615244..616416
AA seq 390 aa
MSNPAGESKNSEGKKKYRGNRYHNNKNRGKNKNEDSKKNEDSKKNEGKVNNGSVSSGSKN
KRNNKKRNREHYNYKRKPKSGKSTENEGYKLVVRLLPPNLTADDFFAIIGNTNSDSDDKE
GIQDKFKYSDWCFFEGHYSSKVFKNSTYSRCNFLFDGLQDLEKFADFIKTCKFIDNKDNI
TTPDLKLSPYVKKFTQTSKKDSAQEGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKS
LDKEFSRSLELENKIAERTERVLTELVGAGDKVKSKNKKKKNKNGKKKYQDEESSNKIPK
KKRNRNKKKHDDREKSSATKTKNSNVVIIEEAGKEVLKQRKKKMLLQEKLKQSNSSQPQS
PSTQAQSSFKFKENTSISRVKILHRDDTEK
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgagcaatccggctggagaatcgaagaatagtgaagggaagaagaaatatagaggaaat
aggtatcacaacaataagaatagaggtaaaaacaagaatgaggactctaaaaagaatgag
gattctaaaaagaatgagggcaaggtaaataacggtagtgtcagcagcggcagtaaaaac
aagagaaacaacaaaaagaggaacagagagcattataactacaaaaggaaacctaaatct
ggtaaatcgactgaaaatgaaggatacaaacttgtcgtcagattattacctccgaatctg
acggcagacgacttctttgccattataggaaacaccaatagcgacagtgatgataaagaa
ggtattcaggataaatttaagtatagtgattggtgtttttttgaaggtcattattctagt
aaagtattcaagaactcaacgtattcaaggtgcaattttctgtttgatggcttacaagat
ttggaaaagttcgcagatttcataaaaacttgtaaattcattgataacaaggacaatatt
acaaccccagacttgaaactttcgccatacgtgaaaaagttcacacaaacgtcgaagaag
gactcggcacaagaggggaccatwgaagaagatgaaatcttcaaaacatttatgaattct
atgaagcagctcaacgaaaatgatgaatactcatttcaggactttagtgtcttgaagtcc
ttggacaaagaattctcaaggagtctagagttggagaacaagatagcagagaggactgaa
agggtattaacagaactagttggtgctggtgacaaggtcaaaagtaagaacaagaagaaa
aaaaacaaaaatggcaaaaagaaatatcaagacgaggaatcaagcaataaaattcccaag
aagaagcggaatagaaacaaaaagaagcacgatgaccgtgagaaaagcagtgccaccaag
actaagaatagcaacgtggtgataattgaggaggcgggtaaagaagtgttaaaacaaagg
aagaagaagatgcttttgcaagagaagttaaagcaatctaattcttctcagcctcaatcc
ccatccactcaagcgcagtcgtcgttcaaattcaaagaaaatacatcgatatcacgagtc
aaaattctacatcgagatgataccgagaagtga

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