KEGG   Saccharomyces eubayanus: DI49_2407
Entry
DI49_2407         CDS       T08138                                 
Name
(RefSeq) DNL4-like protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
seub  Saccharomyces eubayanus
Pathway
seub03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    DI49_2407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_2407
Enzymes [BR:seub01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DI49_2407
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     DI49_2407
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT RNA_ligase Fve DNA_ligase_A_C
Other DBs
NCBI-GeneID: 28931544
NCBI-ProteinID: XP_018221789
UniProt: A0A0L8RIR0
LinkDB
Position
XV:complement(303208..306054)
AA seq 948 aa
MASALPTIPEPQNFAPSPDFRWLCEELFAKVDEVRINGTAGTGKSVSFRYYEIISNFTEL
WRKTVGNNIYPALILALPYRDRRIYNIKDYVLIRTVCSYLKLPKNSPTEQRLKDWKQRVG
KGRSLSSLLVEEISKRRTETTGKFITVDSINDYLDELSEEMNASGRGFKNLVKSKPFLYC
LENMTFVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVVSDLRVVTSKLYDPRVR
LKNDELSIKVGFAFAPQLAKKVNLSYEKICHALRNDFFVEEKMDGERIQVHYMNYGRSIN
FFSRRGIDYTYLYGENLLSGTISQYLKFSDSVKECVLDGEMVTFDAMRKVILPFGLVKGS
AKEALSFNDINNNDFHPLYMVFDLLYLNGTSLTPLPLYQRKEYLSSILTPLKGIVEIVRY
SRCYDAESVKKALEVAISLGSEGVVLKHYNSGYNVASRNNNWIKVKPEYLEEFGENLDLI
IIGRDSGKKDSFILGLLVVDEQETAKTDQEGSPEILNDSSVEQPVKNPKMSVKKVLSFCS
IANGISQEEFKEIDRKTRGHWKKTSGFCPPSSILEFGSKTPAEWIEPSESIVLEIKSRSL
DNTETNMQKYATNCTLYGGYCRRIRYDKEWTDCYTLDDLYENRRTKSNPSHQVENLQLQL
VSKKRKRVLVSDPFHQSREQKPISDIFDGLFFYVLSDYINSVTGVRITRAELDDDIVKHG
GKLIHNVILKRHCIGEVRLIGCKITGECKALIDRGYDILHPRWIMDCTAYKKLLPIEPSY
CFSVSEKLRAVATRRVDCVGDSFENDISESKLSSLQKSQQNLPSTRQVDKSFELQIIPLF
LFSNRIAYIPRSKIGLKDEKLLEMKIRLFGGKITDQQSLCNLIIIPYADPVWRKNCLEKV
HIQIKERVKASDSVSVPRIPRIVAPEWVDHSISENCQVPEEDFPVSYC
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggcatcagcactaccaaccatacctgagcctcaaaactttgcacctagtccagacttt
aggtggctttgcgaagagttatttgccaaagtagatgaggttcgaattaatgggaccgca
ggaaccggtaaatcagtatctttcagatattacgaaataatatcaaacttcacggagttg
tggaggaaaacggtaggaaataacatatatcctgcgttgattctcgctcttccataccgc
gatagacggatctataacataaaggattatgtgttaataagaactgtatgctcttactta
aagttgccgaaaaactctccaacagaacaaagattgaaagattggaaacaacgtgtaggg
aaaggtagaagcctttcttcccttcttgtggaagagataagcaaaagaaggactgaaaca
actggaaaatttattaccgttgacagtattaatgattatctggatgaattaagtgaagag
atgaacgcgtctggacgtggtttcaagaacctcgtcaagtcgaaaccctttctatactgt
ctggagaatatgacttttgtcgagttaaaatacttttttgatatcgtacttaagaataga
gtaattgggggacaagagcacaagcttctgaattgttggcatcctgatgcccaagattac
cttagtgttgtatctgatttaagggtagtgacatcaaaactctacgatccaagagttcgt
ttaaagaatgatgaattgagtataaaagttggctttgcatttgcaccacaactggccaag
aaggtgaacctttcatatgaaaagatatgccatgccttgcgcaatgacttttttgttgaa
gagaaaatggacggtgaacgaatccaagttcattatatgaattatggaagatccataaat
ttttttagtagacgaggaattgactacacatatctatatggagaaaatttactatcggga
actatatcgcaatatttgaagttttcagacagcgttaaggagtgtgttttggatggtgaa
atggttacttttgatgcaatgaggaaagtgattctcccgtttgggcttgtgaaaggaagt
gcaaaagaagcgctttctttcaatgacataaacaataatgatttccatcccctttatatg
gtgtttgatttattatatcttaatgggacctcattgacgccattgcccctttatcagaga
aaagagtatctgagcagtattttgacacccttaaaaggtattgttgaaatagtacgatat
tctagatgctatgatgcagaatcggtaaaaaaggctttagaagttgctatttcactgggt
tcagaaggagttgttttgaaacattataattctggctataatgtcgccagtagaaacaac
aactggataaaggtgaagccagaatatctagaggagtttggagagaatttggatctaatc
ataatcggcagagactctggaaaaaaagactcttttatacttgggctactcgtggtggat
gaacaagaaacagccaaaacggatcaagaaggctcccccgaaattttaaatgattcaagt
gtcgaacagcctgtaaaaaatccaaaaatgagtgttaaaaaagtcctttcattttgttct
attgccaacggaatttctcaagaagaattcaaagagatcgaccgtaaaaccagagggcac
tggaaaaaaacatcaggattttgtcctccatcttctattttagagtttggctcaaaaaca
ccagccgaatggattgaacctagcgagtctatcgttttagaaattaaatcacggtcatta
gataacactgaaacaaacatgcaaaaatatgctaccaactgcactttatatggaggttat
tgtagaagaatacgatacgacaaagaatggacagattgttacacactcgatgatttgtat
gaaaacaggcggactaaatctaatccaagccatcaagttgagaacctccaacttcaactg
gtgtctaagaaaaggaagagggtactagtttctgacccctttcaccaaagcagagaacaa
aagccaatttcagacatttttgacggactgtttttttacgttctctctgattacatcaac
agtgtcactggagtgcggattacacgggcagagcttgatgatgatattgtaaaacatggt
ggtaaattgatacataatgtaattttgaaacgccattgcattggagaagttcgtctaatc
ggttgtaaaattaccggggaatgtaaggctttaattgatcgaggatatgatatattacac
cctcgttggataatggattgtacggcatataagaaacttcttccgatcgaacctagttat
tgctttagcgtctctgaaaaattgagggcagttgcaacaagaagggtggactgtgtcggt
gatagctttgaaaatgatatctcggagagtaagttgtcttcgctacaaaaaagccagcaa
aatttaccatcaacaagacaagttgacaaaagttttgagctccagattattccgttattt
ttgttttccaatagaatagcatacatcccacgcagcaaaatcggtctgaaagatgagaag
cttctagaaatgaaaatcaggctgtttggtggcaaaataacggaccaacagtctctttgc
aacctaatcatcataccatatgccgatcctgtttggagaaaaaactgtttagaaaaggta
catattcaaataaaggaacgggtaaaggcttcggactcggtgagtgtaccaagaataccc
agaattgttgcccctgaatgggtggaccattctataagcgaaaattgtcaagtacctgaa
gaagattttccagtgtcatactgttga

DBGET integrated database retrieval system