Saccharomyces eubayanus: DI49_2407
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Entry
DI49_2407 CDS
T08138
Name
(RefSeq) DNL4-like protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DI49_2407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_2407
Enzymes [BR:
seub01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
DI49_2407
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
DI49_2407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
Fve
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
28931544
NCBI-ProteinID:
XP_018221789
UniProt:
A0A0L8RIR0
LinkDB
All DBs
Position
XV:complement(303208..306054)
Genome browser
AA seq
948 aa
AA seq
DB search
MASALPTIPEPQNFAPSPDFRWLCEELFAKVDEVRINGTAGTGKSVSFRYYEIISNFTEL
WRKTVGNNIYPALILALPYRDRRIYNIKDYVLIRTVCSYLKLPKNSPTEQRLKDWKQRVG
KGRSLSSLLVEEISKRRTETTGKFITVDSINDYLDELSEEMNASGRGFKNLVKSKPFLYC
LENMTFVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVVSDLRVVTSKLYDPRVR
LKNDELSIKVGFAFAPQLAKKVNLSYEKICHALRNDFFVEEKMDGERIQVHYMNYGRSIN
FFSRRGIDYTYLYGENLLSGTISQYLKFSDSVKECVLDGEMVTFDAMRKVILPFGLVKGS
AKEALSFNDINNNDFHPLYMVFDLLYLNGTSLTPLPLYQRKEYLSSILTPLKGIVEIVRY
SRCYDAESVKKALEVAISLGSEGVVLKHYNSGYNVASRNNNWIKVKPEYLEEFGENLDLI
IIGRDSGKKDSFILGLLVVDEQETAKTDQEGSPEILNDSSVEQPVKNPKMSVKKVLSFCS
IANGISQEEFKEIDRKTRGHWKKTSGFCPPSSILEFGSKTPAEWIEPSESIVLEIKSRSL
DNTETNMQKYATNCTLYGGYCRRIRYDKEWTDCYTLDDLYENRRTKSNPSHQVENLQLQL
VSKKRKRVLVSDPFHQSREQKPISDIFDGLFFYVLSDYINSVTGVRITRAELDDDIVKHG
GKLIHNVILKRHCIGEVRLIGCKITGECKALIDRGYDILHPRWIMDCTAYKKLLPIEPSY
CFSVSEKLRAVATRRVDCVGDSFENDISESKLSSLQKSQQNLPSTRQVDKSFELQIIPLF
LFSNRIAYIPRSKIGLKDEKLLEMKIRLFGGKITDQQSLCNLIIIPYADPVWRKNCLEKV
HIQIKERVKASDSVSVPRIPRIVAPEWVDHSISENCQVPEEDFPVSYC
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcactaccaaccatacctgagcctcaaaactttgcacctagtccagacttt
aggtggctttgcgaagagttatttgccaaagtagatgaggttcgaattaatgggaccgca
ggaaccggtaaatcagtatctttcagatattacgaaataatatcaaacttcacggagttg
tggaggaaaacggtaggaaataacatatatcctgcgttgattctcgctcttccataccgc
gatagacggatctataacataaaggattatgtgttaataagaactgtatgctcttactta
aagttgccgaaaaactctccaacagaacaaagattgaaagattggaaacaacgtgtaggg
aaaggtagaagcctttcttcccttcttgtggaagagataagcaaaagaaggactgaaaca
actggaaaatttattaccgttgacagtattaatgattatctggatgaattaagtgaagag
atgaacgcgtctggacgtggtttcaagaacctcgtcaagtcgaaaccctttctatactgt
ctggagaatatgacttttgtcgagttaaaatacttttttgatatcgtacttaagaataga
gtaattgggggacaagagcacaagcttctgaattgttggcatcctgatgcccaagattac
cttagtgttgtatctgatttaagggtagtgacatcaaaactctacgatccaagagttcgt
ttaaagaatgatgaattgagtataaaagttggctttgcatttgcaccacaactggccaag
aaggtgaacctttcatatgaaaagatatgccatgccttgcgcaatgacttttttgttgaa
gagaaaatggacggtgaacgaatccaagttcattatatgaattatggaagatccataaat
ttttttagtagacgaggaattgactacacatatctatatggagaaaatttactatcggga
actatatcgcaatatttgaagttttcagacagcgttaaggagtgtgttttggatggtgaa
atggttacttttgatgcaatgaggaaagtgattctcccgtttgggcttgtgaaaggaagt
gcaaaagaagcgctttctttcaatgacataaacaataatgatttccatcccctttatatg
gtgtttgatttattatatcttaatgggacctcattgacgccattgcccctttatcagaga
aaagagtatctgagcagtattttgacacccttaaaaggtattgttgaaatagtacgatat
tctagatgctatgatgcagaatcggtaaaaaaggctttagaagttgctatttcactgggt
tcagaaggagttgttttgaaacattataattctggctataatgtcgccagtagaaacaac
aactggataaaggtgaagccagaatatctagaggagtttggagagaatttggatctaatc
ataatcggcagagactctggaaaaaaagactcttttatacttgggctactcgtggtggat
gaacaagaaacagccaaaacggatcaagaaggctcccccgaaattttaaatgattcaagt
gtcgaacagcctgtaaaaaatccaaaaatgagtgttaaaaaagtcctttcattttgttct
attgccaacggaatttctcaagaagaattcaaagagatcgaccgtaaaaccagagggcac
tggaaaaaaacatcaggattttgtcctccatcttctattttagagtttggctcaaaaaca
ccagccgaatggattgaacctagcgagtctatcgttttagaaattaaatcacggtcatta
gataacactgaaacaaacatgcaaaaatatgctaccaactgcactttatatggaggttat
tgtagaagaatacgatacgacaaagaatggacagattgttacacactcgatgatttgtat
gaaaacaggcggactaaatctaatccaagccatcaagttgagaacctccaacttcaactg
gtgtctaagaaaaggaagagggtactagtttctgacccctttcaccaaagcagagaacaa
aagccaatttcagacatttttgacggactgtttttttacgttctctctgattacatcaac
agtgtcactggagtgcggattacacgggcagagcttgatgatgatattgtaaaacatggt
ggtaaattgatacataatgtaattttgaaacgccattgcattggagaagttcgtctaatc
ggttgtaaaattaccggggaatgtaaggctttaattgatcgaggatatgatatattacac
cctcgttggataatggattgtacggcatataagaaacttcttccgatcgaacctagttat
tgctttagcgtctctgaaaaattgagggcagttgcaacaagaagggtggactgtgtcggt
gatagctttgaaaatgatatctcggagagtaagttgtcttcgctacaaaaaagccagcaa
aatttaccatcaacaagacaagttgacaaaagttttgagctccagattattccgttattt
ttgttttccaatagaatagcatacatcccacgcagcaaaatcggtctgaaagatgagaag
cttctagaaatgaaaatcaggctgtttggtggcaaaataacggaccaacagtctctttgc
aacctaatcatcataccatatgccgatcctgtttggagaaaaaactgtttagaaaaggta
catattcaaataaaggaacgggtaaaggcttcggactcggtgagtgtaccaagaataccc
agaattgttgcccctgaatgggtggaccattctataagcgaaaattgtcaagtacctgaa
gaagattttccagtgtcatactgttga
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