Saccharomyces eubayanus: DI49_4273
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Entry
DI49_4273 CDS
T08138
Name
(RefSeq) SGS1-like protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
seub
Saccharomyces eubayanus
Pathway
seub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DI49_4273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seub03032
]
DI49_4273
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_4273
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DI49_4273
DNA replication proteins [BR:
seub03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
DI49_4273
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
DI49_4273
Bloom's syndrome complex (BTR)
DI49_4273
FA (Fanconi anemia) pathway
DI49_4273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_Sgs1
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Motif
Other DBs
NCBI-GeneID:
28933410
NCBI-ProteinID:
XP_018220237
UniProt:
A0A0L8RDI8
LinkDB
All DBs
Position
XIII:complement(630112..634503)
Genome browser
AA seq
1463 aa
AA seq
DB search
MVTKPSHNLRREHKWLKETATLQEDKEFVLQAIQKHIANKKPKTNSPPITPSRDVYGAGT
MNLLTSLPGSGSTSTVTKQREDTQTLSNDTEWLSYPATSNQYTDIPMGDIPASTSIVSNP
RTPSGSKTHNTNMLRPPMASSLVENSSSRNMDRRNNTNDVIDSTSTSKQIEKHRDRVERD
IVGLQDSLITTLKEQSKLLLQKCSIIESTSLSEDAKRLQLSRDIRPQLSNVSIRIDSLET
EIAQIKKDALSKSQTKVHSQVPSQNNNIISSILPSPLDNNLSFKSTNLATTTATAATMAV
SARAATATFTKSPKTNANNDNHDDDLIQVLDDEDDDDANNDPTIILQKGLVDIPQNNTPI
SPSPPRLDMTTEEQDELTRRRNMRSREPVNYRIPERDDPFDYIMGKSLREDCPEFEREED
ELTMEAEDDDHSSYMTTRDEEKEENDLLNQSDFDFVVNDGLEATQDTDYHDNLDGCANIK
EDPLEDDTRSTITLSQNKNVQVILSSPTTQSDISSRQRQTDVEHIDLLEDDLERDAILDD
SISFSFGNQNLPMSHSDLELIDSEKESGEYDEDNNNNNNNFENLSDSDLERFDEERENRT
QAADIQELDNDLKIITERKLTSDHDLQSPSWSPTIKRERSNASQKKGEEDDFDDDFSLSD
IVSRSKLTSKAKGPIYPWSDEVLYRLHEIFKLPGFRPNQLEAVNATLQGKDVFVLMPTGG
GKSLCYQLPAVVKLGKTHGTTIVVSPLISLMQDQVEHLLNKNIKASMFSSKGTAEQRRQT
FNLFINGLLDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDY
KELKFFKREYPDIPMIALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVKKKTK
NTIFEICDAVKLRFKNETGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQK
AWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYF
SFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSKL
CHKNCDNCRNSANVINEERDVTDPAKKIVKLVESIQNERVTIIYCQDIFKGSRSSKIVQA
NHDTLDEHGLGKSMQKSEIERIFFHLITIRVLQEYSIMNNSGFASSYVKVGPNARKLLSG
KMEIRMQFTISAPNSRPSTSSGHQSNGDNTPAIAQRSTTLGENTAVNPARFISAKEHLRS
YTYSSSTTESSHPISLKNNTELHSTQELNNLRMTYERLRELSLNLGNRMVPPVGNFMPDS
ILKKMATILPMSESAFASLGPVEDKYCRRFKYFKATIADLSNKRSSREHEKYDTILNEES
VNRISSSTNQVISTTGTRSRFFGANPSEVKENEQIINQIRESQLPKSSISTKASTKAISK
PTKKPANGKRGFKNYKGHYRRRK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgaaaccgtcgcataacttaaggagggaacacaagtggttgaaagaaacggcg
actttgcaagaagacaaggagtttgtgttgcaggctattcaaaagcatatagcgaacaag
aagccaaagacaaattcgccaccgattacgccgtctagagatgtgtatggagcagggaca
atgaacctgttaaccagccttcctggatctggttccactagcaccgttacgaaacagcgc
gaggacacgcaaaccctatcaaacgacacggaatggctctcctaccctgccacatcgaac
caatataccgacatccccatgggagatataccggccagcacaagtatcgtatcgaaccca
aggacacccagcggttcgaaaacacacaacaccaatatgcttcgaccgcccatggcgagt
tctcttgtcgaaaatagcagcagtagaaacatggatcgcagaaacaataccaacgacgtg
attgatagtacaagcacgagcaaacagatcgagaagcatcgagacagggtagagagagat
atagttggacttcaggactcattgattactaccttgaaggagcaatcaaaattgttactc
caaaaatgtagtataattgaatctacatcattgtcagaggatgccaaaaggttacaattg
agtagggacatacggccccaattatccaacgtatctatcagaatagactctttagaaacg
gaaatcgcacaaattaagaaagacgcactttcgaaaagtcaaactaaagttcacagccag
gttccctcacaaaacaataatattatatcaagtattttacccagtccattagacaacaac
ctatctttcaaaagcacaaatctggcaaccactactgcaaccgctgcgactatggcagta
tctgcccgtgcagctactgcaactttcacgaaaagcccaaaaactaatgctaataatgat
aaccacgatgatgacttaattcaggtgctagacgatgaggatgatgatgatgcaaataac
gatcctaccattatcctacaaaaagggttagtcgatataccgcaaaacaatactccaatt
tctccttcaccgccacgtctggatatgaccacagaagaacaagatgaacttacaagaaga
agaaatatgcgttcaagagaaccagttaactatagaattcctgaaagagatgaccccttt
gactatattatgggtaaatcattgagagaggattgcccagaattcgaaagagaagaagat
gaactcacaatggaggctgaagatgatgatcattctagttatatgactactagagatgaa
gaaaaggaagaaaatgatttgttgaaccaaagtgattttgattttgtagtgaatgatggt
cttgaggccacccaggatactgattaccatgacaatctggatgggtgtgcaaatattaaa
gaagatcccttagaagacgatactaggtccacaattactttatcacagaataaaaatgtt
caagttattttatcttccccaacaacacaaagtgacatatccagccgtcaaaggcaaaca
gatgtggagcatattgatttactggaagacgatttagaaagggatgctattttggatgat
agcataagtttttcctttggtaaccaaaacttacctatgtcacattctgatttagagtta
attgacagtgaaaaggaaagtggtgaatacgatgaagataacaacaacaacaacaacaac
tttgaaaacctatcagatagcgatttagaaagattcgacgaagaaagagaaaatagaacc
caagctgcagatattcaggaactggataatgacctgaagatcataacagaaaggaagctt
acaagtgatcacgatctgcaatcaccctcttggtctcctacgattaaaagagaaagatcg
aacgctagtcaaaaaaaaggcgaggaagatgattttgatgacgatttttcactaagtgat
atagtgagcaggtctaaactgacttctaaggcgaaaggtccaatttatccgtggtcggat
gaagttttataccgcttgcacgaaatatttaaactacccggctttagacctaatcagtta
gaggcagtcaatgcaactttacaaggtaaggacgtttttgttcttatgccgacagggggt
ggtaaatcgctttgctatcaacttcctgcagtggttaaactaggcaagacgcatggtact
accattgtcgtttctcccttaatttctttgatgcaagatcaagtggaacatttgttgaat
aaaaatatcaaggcaagcatgttcagttcgaaagggaccgccgaacaaaggagacaaacc
tttaatttgtttattaatgggttattggatttggtttatatatctcctgaaatgattagt
gcttctgaacagtgtaagagagccattagtagactatatgcggatggaaagttggctcgt
attgttgtagatgaagcccattgtgtttctaactggggtcatgattttaggcctgattac
aaagaattaaaattctttaagagggaatatcccgatattccaatgatcgctctaactgca
actgcaagtgaacaagtaagaatggatatcattcacaatctagaactaaaagatccagtt
ttcttaaagcaaagttttaacagaactaatttgtactatgaagttaaaaaaaagaccaaa
aataccattttcgagatctgtgacgctgttaaattgagatttaaaaacgaaactggcatt
atatattgtcattctaaaaaatcttgtgagcaaacgtcagcccaaatgcagagaaatggc
atcaaatgcgcctattaccatgcaggtatggaacctgatgaaagactaagtgttcaaaag
gcgtggcaggctgatgaaatccaggtgatttgtgctaccgtcgcgtttgggatgggtatt
gataaacccgatgttaggtttgtttaccatttcaccgtgccacgaacattagaaggctat
taccaagaaactggtcgtgccggtagggatggcaattattcatactgtatcacctatttc
tcgtttcgagatatcagaactatgcaaacaatgattcaaaaagataagaatttagacaga
gagaacaaggagaaacatttaaataagttacagcaggtgatggcatactgtgacaacgtc
acggattgtagaagaaaattagtgctatcttacttcaatgaggattttgattctaaattg
tgtcacaagaactgtgacaattgcaggaatagtgcaaatgtaataaacgaggaaagagat
gttacggatcccgccaaaaaaattgtgaaactggtggagagtattcaaaatgaaagagtc
accataatttactgtcaagacattttcaaaggttcaagaagctccaaaattgtacaggct
aatcacgatacattagatgaacacggccttggtaagtccatgcaaaaatcagaaatcgaa
agaattttttttcatttgatcactatccgtgtcttacaagagtattctatcatgaataac
agtgggtttgcttcgagttatgtaaaagttggacccaatgctagaaaattactcagtgga
aaaatggagataaggatgcaatttacgatatcagcaccgaactctcgtccatcaacatct
tctggccatcaatcaaatggggataatacgccagctatagctcaaagatcaacaactctt
ggggagaatacagctgttaaccctgcacgctttattagcgcgaaagaacacctaagatcg
tatacctacagtagttcaacaacggaatcatcacatcctatatcattaaaaaacaatacc
gaattacattcgacccaagaactaaacaatctacgaatgacatacgaacggttaagagaa
ttatcattaaatttaggaaatagaatggttcctccggtggggaactttatgcccgactct
atcttaaagaaaatggcgacaattttgccaatgagtgaatcggcttttgcatctttgggt
ccagtagaggacaaatattgtcggaggtttaagtactttaaagccacaattgctgatctt
agtaacaaaagatcaagcagagaacatgaaaaatacgataccatattaaatgaagagtct
gtcaatagaatatccagttcaaccaatcaagttatctccacaacaggaacacgatctagg
ttttttggcgctaaccctagtgaagttaaggaaaatgaacaaataatcaatcaaattagg
gaaagtcagttaccaaaaagttcaataagcacaaaagcatctacaaaagcgatcagcaaa
ccgactaagaaacctgctaatgggaagcgaggttttaaaaactataaaggccactacaga
agaagaaaataa
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