Saccharomyces eubayanus: DI49_5341
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Entry
DI49_5341 CDS
T08138
Name
(RefSeq) TFB2-like protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
seub
Saccharomyces eubayanus
Pathway
seub03022
Basal transcription factors
seub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DI49_5341
09124 Replication and repair
03420 Nucleotide excision repair
DI49_5341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seub03021
]
DI49_5341
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_5341
Transcription machinery [BR:
seub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DI49_5341
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DI49_5341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
bPH_7
Motif
Other DBs
NCBI-GeneID:
28934477
NCBI-ProteinID:
XP_018218913
UniProt:
A0A0L8R9S4
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Position
XVI:complement(299658..301199)
Genome browser
AA seq
513 aa
AA seq
DB search
MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL
DLDKWVNSNGKLQFQDAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS
FGIVVEDNVVSLNLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEINSTG
EFKITNEGFQFLLQEINSQLWSLLLQYLKVIETSKMDLVDVLHFIFMLGALEVGKAYKID
ALSETQRIMLQDMRDYGLVFQKHSNDTIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR
EEPSVNEDGNNGKPTGDINIPDDLNKVDSKSQDIPDGSLIVETNFKIYSYSNSPLQIAVL
SLFVHLKARFVNMVLGQITRESIRRALTNGITAEQIIAYLETHAHPQMRRLAEEKLEKKL
ELDANCKEPLQILPPTVVDQIRLWQLELDRVMTYDGSLYSDFETTQEYSMLNKYAQDIGV
LLWKDDKKRKFFISKEGNSQVLDFAKRKLKKKQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactactccttgaaacactcagttacccagtatttggaagaaattccccagcaa
gtgcaaaatagactatacacttcaccagctacatgtttggccatctatagaattttacca
cctttagccaaattttttatcatggcaatggtttttaatgaaaacgaagtccctctatta
gatctagataaatgggttaactcaaatggtaaattgcagtttcaagatgcaatcaaatca
atgaagtctttgcatcttctcataccaaacaagtcttctggtactttgatgatcaaccta
aatccaactttcaaaatcagtctgagaaacgcgttgacaggcggagaggttcagaattcg
tttggtatcgttgtagaagataatgtggttagtttgaacctattggacgaatattcagcc
aataaatgggaaactatattacatttcatggttggtactcctctagctaaaattccatcc
gaaaaagttttgaatcttctgaagcacagtaaacttatggaagaaataaactccaccggt
gaattcaaaatcactaatgaaggttttcaatttcttttacaagaaattaactcccagtta
tggtctttactactacagtatttaaaagtgattgaaacgtccaaaatggatttagtcgac
gtgttacatttcattttcatgttaggtgcattagaagtcggtaaggcgtacaaaatcgat
gcattaagtgaaacgcagaggattatgttacaagatatgagagattatggactagttttc
cagaaacattcaaacgataccattttttatccaactaaattagctttaatgctaacttcc
gatacaaaaacgattagatcggcctccaatgcgatggatagtgtattaagacagaacagg
gaggaaccctcagtgaatgaggacggcaacaatggtaagcctacaggagatatcaatata
cccgatgatttaaacaaagttgattcgaaaagtcaggatatacctgatggttcattaatt
gtagaaacaaatttcaagatttattcatattccaattctccgttacaaattgccgttttg
tctcttttcgttcatttgaaggcaaggtttgttaatatggttttgggccagataacaagg
gaatctattagaagagcactgaccaacggtatcactgcggaacaaatcattgcatattta
gaaacacatgctcatcctcaaatgaggaggttggctgaggaaaagttggagaaaaaacta
gagctagacgccaactgtaaagagccattacaaatcctacctccaacggtagtagatcaa
atcagattatggcaactagagctagatagagttatgacatacgatggctctttgtactcc
gattttgaaaccactcaagagtacagtatgctgaataaatatgctcaagatattggtgtg
ttattatggaaagacgacaaaaagaggaaattcttcatttcaaaggaaggtaattcacaa
gtactcgatttcgccaaaagaaagttaaaaaagaaacagtag
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