KEGG   Saccharomyces eubayanus: DI49_5341
Entry
DI49_5341         CDS       T08138                                 
Name
(RefSeq) TFB2-like protein
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
seub  Saccharomyces eubayanus
Pathway
seub03022  Basal transcription factors
seub03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DI49_5341
  09124 Replication and repair
   03420 Nucleotide excision repair
    DI49_5341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seub03021]
    DI49_5341
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_5341
Transcription machinery [BR:seub03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     DI49_5341
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     DI49_5341
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3 bPH_7
Other DBs
NCBI-GeneID: 28934477
NCBI-ProteinID: XP_018218913
UniProt: A0A0L8R9S4
LinkDB
Position
XVI:complement(299658..301199)
AA seq 513 aa
MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL
DLDKWVNSNGKLQFQDAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS
FGIVVEDNVVSLNLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEINSTG
EFKITNEGFQFLLQEINSQLWSLLLQYLKVIETSKMDLVDVLHFIFMLGALEVGKAYKID
ALSETQRIMLQDMRDYGLVFQKHSNDTIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR
EEPSVNEDGNNGKPTGDINIPDDLNKVDSKSQDIPDGSLIVETNFKIYSYSNSPLQIAVL
SLFVHLKARFVNMVLGQITRESIRRALTNGITAEQIIAYLETHAHPQMRRLAEEKLEKKL
ELDANCKEPLQILPPTVVDQIRLWQLELDRVMTYDGSLYSDFETTQEYSMLNKYAQDIGV
LLWKDDKKRKFFISKEGNSQVLDFAKRKLKKKQ
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgagtgactactccttgaaacactcagttacccagtatttggaagaaattccccagcaa
gtgcaaaatagactatacacttcaccagctacatgtttggccatctatagaattttacca
cctttagccaaattttttatcatggcaatggtttttaatgaaaacgaagtccctctatta
gatctagataaatgggttaactcaaatggtaaattgcagtttcaagatgcaatcaaatca
atgaagtctttgcatcttctcataccaaacaagtcttctggtactttgatgatcaaccta
aatccaactttcaaaatcagtctgagaaacgcgttgacaggcggagaggttcagaattcg
tttggtatcgttgtagaagataatgtggttagtttgaacctattggacgaatattcagcc
aataaatgggaaactatattacatttcatggttggtactcctctagctaaaattccatcc
gaaaaagttttgaatcttctgaagcacagtaaacttatggaagaaataaactccaccggt
gaattcaaaatcactaatgaaggttttcaatttcttttacaagaaattaactcccagtta
tggtctttactactacagtatttaaaagtgattgaaacgtccaaaatggatttagtcgac
gtgttacatttcattttcatgttaggtgcattagaagtcggtaaggcgtacaaaatcgat
gcattaagtgaaacgcagaggattatgttacaagatatgagagattatggactagttttc
cagaaacattcaaacgataccattttttatccaactaaattagctttaatgctaacttcc
gatacaaaaacgattagatcggcctccaatgcgatggatagtgtattaagacagaacagg
gaggaaccctcagtgaatgaggacggcaacaatggtaagcctacaggagatatcaatata
cccgatgatttaaacaaagttgattcgaaaagtcaggatatacctgatggttcattaatt
gtagaaacaaatttcaagatttattcatattccaattctccgttacaaattgccgttttg
tctcttttcgttcatttgaaggcaaggtttgttaatatggttttgggccagataacaagg
gaatctattagaagagcactgaccaacggtatcactgcggaacaaatcattgcatattta
gaaacacatgctcatcctcaaatgaggaggttggctgaggaaaagttggagaaaaaacta
gagctagacgccaactgtaaagagccattacaaatcctacctccaacggtagtagatcaa
atcagattatggcaactagagctagatagagttatgacatacgatggctctttgtactcc
gattttgaaaccactcaagagtacagtatgctgaataaatatgctcaagatattggtgtg
ttattatggaaagacgacaaaaagaggaaattcttcatttcaaaggaaggtaattcacaa
gtactcgatttcgccaaaagaaagttaaaaaagaaacagtag

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