Saccharomyces eubayanus: DI49_5344
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Entry
DI49_5344 CDS
T08138
Name
(RefSeq) DBP1-like protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
seub
Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_5344
03041 Spliceosome [BR:
seub03041
]
DI49_5344
03036 Chromosome and associated proteins [BR:
seub03036
]
DI49_5344
Enzymes [BR:
seub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DI49_5344
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
DI49_5344
mRNA cycle factors
Common to processing body (P body) and stress granule
DI49_5344
Spliceosome [BR:
seub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
DI49_5344
Chromosome and associated proteins [BR:
seub03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
DI49_5344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
28934480
NCBI-ProteinID:
XP_018218916
UniProt:
A0A0L8R9Y7
LinkDB
All DBs
Position
XVI:complement(304773..306629)
Genome browser
AA seq
618 aa
AA seq
DB search
MSDLSQNVAKLNINDKENGNDGGKPSYVPPHLRGSGKPAFRRTGPPREDRGSGGGFFSRS
SKQAGDNDGFFGFSKGNNGGSTYNRGGSSSFKSSGNRWVNGKHVPGPKNARLEAELFGVH
EDPDYHSSGIKFDNYDDIPVEASGKDVPEPLLEFDSPPLDALLLENIKLAGFNKPTPVQK
YSVPIVTNNRDLMACAQTGSGKTGGFLFPVFTELFESGPSPMPEKAQSFYSRKGYPSALV
LAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLL
ERGKISLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVGNRQTLMFSATFPVDIQH
LARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAEHEGLTLIFVETKR
MADQLTDFLIMQNFRATAIHGDRTQAERERALSAFKSNVANILVATAVAARGLDIPNVTH
VINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLIEILNEANQEVPAFLN
DMSRQNLRGGKTRGGGGGGFFNNRNNNSRDYRKHGGNGSFGNTRPRNTGTSNWGSSSGGG
FRNDNENSGFGSSNASWW
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttgtcccagaacgtagctaagctaaacattaacgacaaagaaaacggtaac
gatggcggcaaaccttcgtatgtcccaccacatttaagaggcagcggtaaaccggcgttt
aggagaaccggtcccccaagggaggatagaggttcaggtggaggattctttagtcgttcg
agcaagcaggccggcgataatgacggtttttttggtttttctaaaggaaacaatggagga
tcgacttataaccgcggaggcagttcaagtttcaagtcatcaggaaacagatgggtgaac
gggaaacacgtacccgggccaaagaacgcaaggttggaggctgaactattcggtgtacac
gaagatcccgattaccactcatctggtattaagttcgataattacgacgatatccctgta
gaggcatccggtaaagatgttccagaaccgctattagagtttgattctccacctctggat
gcattgctactggaaaatattaaacttgctgggttcaataagcctaccccagtgcaaaaa
tactccgttcccattgttactaataatagggatttgatggcctgcgcccaaactggttca
gggaagaccggcggatttttgtttcccgtctttacggagttgtttgagtcgggaccttcc
ccgatgcctgagaaggcacaaagcttttattctaggaagggatacccatctgctctagtc
ctggcgccaacaagagaattggcaactcaaatttttgaagaggctagaaaattcacttac
agatcatgggttaggccatgtgttgtttatggtggtgcaccaatcggtaaccaaatgagg
gaggtcgaccgtggttgcgatttactggttgctactccaggtcggttgaatgatttattg
gaacgtggaaaaatttctttggccaatatcaagtacctcgtcttagatgaagctgataga
atgttggatatggggttcgaacctcaaatccgccatatcgttgaagaatgtgatatgcca
tctgtaggtaacagacaaactttaatgttttctgccacattcccagtggatattcaacat
ttggcccgtgatttcctagataattacatctttttgtctgtaggaagagttggttccact
tcagaaaatatcacacaaagaatattatatgtggatgatatggataaaaaatctgcttta
ctggatttactatctgcagagcatgaaggtttaacgttgatttttgtcgagacaaagaga
atggctgatcagttgactgattttttgatcatgcaaaacttcagagccacagctattcac
ggtgatcgtacacaagctgaacgtgagcgcgcattatctgccttcaaatctaacgtggcc
aatatattagtcgcaactgccgtagcggcaagaggtttagatattccgaatgtcacccac
gtcattaattatgacttgccttctgatattgatgattatgttcatagaattggtagaacc
ggtcgtgctggcaacaccggtgttgctacttcattctttaatagtaataaccagaatatt
gtaaaaggcctgattgaaatattgaacgaagcgaaccaagaagtgccagcatttttaaat
gatatgtcaaggcagaatttaagaggtggtaaaactagaggtggaggcggcggaggtttc
ttcaataaccgcaacaacaattcaagagattatcgtaagcatgggggcaatggttccttt
ggaaatacaaggccaagaaatactggaacatcaaactggggttccagcagtgggggaggg
tttaggaacgataatgaaaacagtggttttgggagtagcaatgcttcatggtggtaa
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