Salmonella enterica subsp. enterica serovar Typhi P-stx-12: STBHUCCB_2120
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Entry
STBHUCCB_2120 CDS
T01741
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sex
Salmonella enterica subsp. enterica serovar Typhi P-stx-12
Pathway
sex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STBHUCCB_2120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sex03019
]
STBHUCCB_2120
Enzymes [BR:
sex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
STBHUCCB_2120
Messenger RNA biogenesis [BR:
sex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
STBHUCCB_2120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
PhoR
Motif
Other DBs
NCBI-ProteinID:
AEZ43972
LinkDB
All DBs
Position
complement(218282..219646)
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AA seq
454 aa
AA seq
DB search
MLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHNEGSE
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGV
IRLIGNPETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGNGFETYQQLREYHLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMR
VNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENNTELQRLAQWWAEFQASAP
PEQKGMLNELDDDPAPRRRRSRPRKRAPRREGTV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgttaagccgcgaggagagcgaggcagaacaagccgtcgcccgtccacatatgacgatt
atcccgcgtgaacagcacgctatctcccgcaaagatatcagtgaaaatgccctcaaggta
ctgtacaggctgaacaaagcgggctatgaagcctacctggtcggcggcggcgtccgcgat
ctcctgctcggtaaaaagccgaaggatttcgatgtgaccaccaacgcaacaccggatcag
gtacggaaattattccgcaattgccgtctggtggggcgtcgtttccgcctggctcacgtg
atgtttggcccggaaattatcgaagtggcaacgtttcgtggtcataatgaaggcagtgaa
agcgaccgtacgacctcccagcgtgggcaaaacggtatgctgctgcgcgacaacatcttc
ggctctatcgaagaagatgcccagcgccgcgatttcaccatcaacagcctttactacagc
gtggcggattttaccgtgcgcgattacgtcggcgggatgcaggatctgcaagaaggcgtg
attcgcctgatcggcaatccggaaacgcgctaccgcgaagatccggttcgaatgctgcgc
gccgtgcgtttcgctgcgaagctcaatatgcgtatcagccctgaaacggctgagccaatc
ccgcgtctggcaaccttgctaaacgacattcctcccgcgcgcctgttcgaagaatcgctg
aagctgttgcaggcggggaacggttttgaaacctatcaacaactgcgggaataccacctc
ttccagccgttgtttcctaccattacgcgttatttcaccgaaaacggcgacagcgcaatg
gaacgcatcattgcgcaggtgttgaagaatacggataaccgcatccgtaacgagatgcgc
gttaacccggcatttttgtttgccgccatgttctggtatccgctgctggagatggcgcaa
aaaatcgctcaggagagcggccttgcctattacgatgctttcgcgctggccatgaatgac
gtgctggatgaagcctgccgttcactggcgatcccgaaacgccttaccacgcttacccgt
gatatttggcagcttcagttacgcatgtcgcgacgccagggcaaacgcgcctggaagctg
atggaacatcccaaattccgcgccgcgtttgatttgctggagctgcgcgcccaagtggaa
aataatactgaactgcaacgtctggcgcagtggtgggccgagtttcaggcttccgcgccg
ccggaacaaaaagggatgctcaacgagctggacgacgatcctgctccacgccgccgtcgt
tcacgtccgcgcaaacgcgcgccgcgccgcgagggcaccgtatga
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