Sulfitobacter faviae: PL335_03940
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Entry
PL335_03940 CDS
T08789
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfav
Sulfitobacter faviae
Brite
KEGG Orthology (KO) [BR:
sfav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfav03032
]
PL335_03940 (topA)
03400 DNA repair and recombination proteins [BR:
sfav03400
]
PL335_03940 (topA)
Enzymes [BR:
sfav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PL335_03940 (topA)
DNA replication proteins [BR:
sfav03032
]
Prokaryotic type
DNA Topoisomerases
PL335_03940 (topA)
DNA repair and recombination proteins [BR:
sfav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PL335_03940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
HC2
Motif
Other DBs
NCBI-ProteinID:
WCE68258
LinkDB
All DBs
Position
complement(799537..802206)
Genome browser
AA seq
889 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDDYTVLASYGHVRDLPPKDGSVDTDADFDMKWEVASDSKK
HVKAIADALAQDNALILATDPDREGEAISWHLQEALTKRKSIKKDTPVSRVVFNQITQKA
VTEAMQNPRQVDMPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVTLRLIVE
REMEIEAFRAREYWSVKALLATPRGQEFEARLISLAGNKLERFDLADATQAEMAVQAITS
RALKVMNVEAKPASRNPSAPFMTSTLQQEASRKFSMGARQTMSTAQRLYEAGHITYMRTD
GIDMAPEAVSMARDAIKDRFGADYVPKEPRIYKNKAKNAQEAHECIRPTDMTKDAKALKL
DADQAKLYDLIWKRTLACQMESARLERTTVEIGSDDAQVGLRANGQVVLFDGFLKVYEEG
RDDVVDEDDKRLPQISQGDAMDKRSVTPEQHFTQPPPRYTEATLVKKMEELGIGRPSTYA
SIVTTIQDREYVRKDGNRLIPEDKGRLVTAFLENYFRRYIGYDFTADLEDQLDKVSAGDA
AYKEVLRRFWRDFSAAIAETSELRITEVLEKINEVLEPHLFPPTEDGSDPRLCPNCEIGR
LSMRTARSGGAFIGCSNYPECRYTRPFGPPDPEAEASAIPPDGKLLGEDQGDEIRVFKGR
FGPYVQRGPVTEENKKPPRQSIPKDWVPEDLTLEQGVMLLSLPREIGPHPEDGVMVWANI
GRYGPYIKHAESTSHRGGTNANLEGIDEVWTVGMNRAVQLLAEKVASRGGRGKAAKPIRE
MGEHPDMGGAVNVMEGKYGPYVKWEKVNATIPKEIEPADLTMERAVELIEEKLAKSPAKR
KAATKKAPAKKTAAKKPGAKKTATKKAPAKTEAKKPAAKKTTAKKADSA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgaatccccagccaaggccaaaacgatcaacaaatatctgggc
gacgattacaccgttctcgcctcttacggccacgtccgcgacctgccgccaaaagacggc
tcggtggataccgacgccgatttcgacatgaaatgggaggtcgccagcgacagcaagaaa
cacgtcaaagccatcgccgatgcgctggcccaagacaacgcattgatcctcgcgactgac
cccgaccgcgagggtgaggcgatcagctggcacctgcaagaggcgctgaccaagcgcaaa
tcgatcaagaaagacacgcccgtcagccgcgtggtcttcaaccagatcacccagaaggcg
gtgaccgaggcgatgcagaacccgcgtcaggtcgacatgccgctggtagaggcctacctc
gcccgacgcgcgctggactatctggtggggttcaacctctcccccgtgctctggcgcaag
ctgccgggcgccaagtctgcgggccgcgtgcaatcggtcaccctgcgcctcatcgtcgag
cgcgagatggagatcgaggctttccgcgcccgtgagtattggtcggtaaaggcgctgctc
gccaccccgcgcgggcaggagttcgaagcccgccttatctcgctcgccggaaacaagctg
gaacgcttcgatctcgccgatgccacgcaggccgaaatggcggtgcaggcgatcacctcc
cgcgcgctgaaggtgatgaacgtcgaggcgaaaccggcgagccgcaacccttcggccccc
ttcatgacctcgaccctgcaacaggaggccagccgcaagttttcgatgggcgcacgccag
accatgtcgaccgcacagcgcctctatgaggccggccacatcacctacatgcgaaccgac
ggcatcgacatggcgccagaggccgtctcgatggcgcgcgatgcgatcaaggaccggttt
ggcgcggattatgtcccgaaagagccgcgcatctacaagaacaaggcgaagaacgcgcag
gaagcccacgaatgtatccgcccgacggatatgaccaaggacgccaaggcgctgaagctc
gatgccgatcaggcgaaactctatgacctgatctggaaacgcacgctggcatgccagatg
gaaagcgcgcgtcttgagcgcaccaccgtggagatcggcagcgatgacgcgcaggtgggt
ctgcgtgccaacggtcaggtcgtgttgtttgatggcttcctgaaggtctacgaggaaggc
cgcgacgatgtcgtcgacgaggacgacaaacgcctgccccagatcagccaaggcgacgcg
atggacaagcgcagcgtcacgcccgagcaacatttcacccagcccccgccgcgctacacc
gaggcgacgctggtcaagaagatggaagagctcggcatcggccgcccctcgacctatgcc
agcatcgtcaccacgattcaggaccgcgaatatgttcgcaaggatggcaaccgcctgatc
cccgaggacaagggccgtctggtgaccgccttccttgagaattatttccgccgctacatc
ggctatgacttcaccgccgatctggaggatcaactcgacaaggtcagcgccggggatgcc
gcctataaagaagtgctgcgccgcttctggcgcgatttctcggccgccatcgcggagacg
tcggagctgcgcatcaccgaggtgctggaaaagatcaacgaggtactggagccgcatctc
ttcccgcccaccgaagacggcagtgacccgcggctttgccccaattgcgagattggccgc
ctgtcgatgcgcaccgcgcgctcaggcggtgccttcatcggctgttcgaactaccccgaa
tgccgctatacccgccccttcggcccaccagacccggaggccgaagcctccgccattccg
cccgacggcaagctgctgggtgaggatcagggcgacgaaattcgcgttttcaagggtcgc
ttcgggccttacgtccagcgcggcccggtgacggaagagaacaagaaacccccgcgccag
tcgatccccaaggattgggtgcccgaggatctgacgctggaacagggcgtgatgctcctg
tcgctcccgcgtgagatcggcccccaccccgaggatggcgtcatggtctgggccaacatc
gggcgctatgggccttacatcaagcacgccgaaagcacctcgcatcggggcggcaccaat
gccaatctcgaaggcatcgatgaggtttggaccgtcggcatgaaccgcgcggtgcagttg
ttggccgagaaagtcgccagccgcggtggccggggcaaggccgcgaaaccgatccgcgag
atgggcgagcacccggatatgggcggcgcggtcaacgtcatggagggcaaatacgggcct
tatgtgaaatgggaaaaggtgaacgccacgatcccgaaagagatcgaaccggcagacctg
accatggagcgcgcggtggagctgatcgaagagaagctcgccaaatcccccgccaaacgc
aaagcggcgacgaagaaggcaccggccaagaagacggcagccaaaaagcccggggcgaaa
aagacggccaccaagaaggctccggcaaaaacggaggccaagaaacccgcggccaagaaa
acaaccgcgaaaaaagccgacagcgcgtaa
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