Sinorhizobium fredii USDA 257: USDA257_c11690
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Entry
USDA257_c11690 CDS
T02188
Symbol
nodV1
Name
(GenBank) nodulation protein V
Organism
sfd
Sinorhizobium fredii USDA 257
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_4
PAS_9
HATPase_c
PAS_8
dCache_1
HAMP
HisKA
Cache_3-Cache_2
PAS_11
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
AFL49760
UniProt:
I3X1K4
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Position
complement(1227762..1230896)
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AA seq
1044 aa
AA seq
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MLRHRLIFPVAGVVLVLSLVLAGLWFWTGNAIVSFMSERLIRDVTQAVHRDVDHLVRGAD
KAVSRLANALVRHDLSLSDPHAVARELHALLAEEPDIDWMFFGNEAGGLVSVGRLADSNS
VFLMTDNFRAGAVREFEALPSGRIGRLRKSEGAFDARRRIWYSKAKETGERYWTEPYLGL
VEPILGISLSAPVLDRNGNFVGVCGIDLILAQLSRFLQTLEIGENGRAFIIDASGHLIGA
SGGVSPVTIGADGGHLRLQASKATDPIVRETARYLGRHAGVAGSSSAGLHVFSFSDPERG
RIYAAVDRVEGPGALDWTIISAVPAADFLRPVYRAAYLSIGVGAVIVGVFVLLGLGLVGR
TLRPLTALTQAAHAIAKGDWRDVPELRRNDEVGLLAQAFTLMTSRLKETLEGLRRSEANF
AEAQRVAHVGYWERDLSTDCLTWSDETYRIFGLTPRATAVVSLAEAVERIHPEDRSFWSQ
AAAKAVRGESRYDLEYRIVRPTGEVRIVHSQGDLTREASGRPRSMFGTIQDITERKRVEG
ALRDSEEQWRAVFENNPTMYFMVDATGTIVSVNPFGAEQLGYTVDELIDRPVQDIFHEAD
RDAVQRHAATCLEHLGRAMSWELRKFRKDGSMLWVRETARAMVVKKRPVILIVCEDITER
KRAEEAARRSEEELREVIETVPAMVWTALPDGRVDFINRRWQEFTGLSLEGSFAENWKPE
SRFHPDDLEQYMSKWRMSLATGRPFEAEVRICRASDGEYRWWFESAVPLRDEHGDILKWY
GFLVDIEDRKRAEEALQKAQAELAHVTRVTTMGALTSSIAHEVNQPLAAVVTNANAALRW
LATQPPNLDEARETLGRIVRDGHRAGEVIGRVRALLKKTASVTAQVDLNGLIEESVVLVH
EEVRRQRVLLRTELAHELPPVAGDRVQLQQVILNLVMNGIESMKKVADRPRELLIRSRAD
TSGAVLVEVQDTGVGLEPQSLEQVFEAFYTTKAEGLGMGLAICRSIIEAHGGRLWAGANE
PWGAVFQFALPSDPDESACRGQRV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacaccgtttgatcttccctgtcgccggcgtcgttctcgttctaagtctggtc
ctggccggtctatggttttggacgggaaacgccattgtctcgttcatgtccgagcgcctg
atccgagacgtgacgcaagctgtgcatcgcgacgtcgatcatttggtgcgcggtgccgac
aaggcggtgtcgcggttggccaacgctcttgttcgtcacgacctgtcactcagcgacccg
catgctgttgcgcgagagctccatgcattgctggccgaggaacccgatatcgactggatg
tttttcggcaacgaggccggcgggcttgtttcggtcgggcgactggcagactcgaactcc
gtgtttctgatgaccgataactttcgcgccggcgccgtgcgcgagttcgaagcgttgcca
agcggcaggatcggccgtttgcgaaagtcggaaggcgcgttcgatgctcgtcggaggatc
tggtactcgaaggcgaaagagacgggcgaacggtactggaccgagccctatctcggtctc
gtcgagccgatactgggcatctcgctctccgccccagtgttggacaggaacggcaacttc
gtcggggtgtgcgggatcgatctcatcctggcccaactttccaggttcttgcagacgctc
gagatcggcgagaatgggcgggctttcatcatcgacgccagcggacatttgatcggcgcg
tccggaggagtgtcgcccgtcacaatcggagcggacggcggacatctgcgcctgcaggcg
tcgaaagcaaccgatcccatcgttcgtgaaaccgcgcgctatcttgggcggcacgccggc
gtcgccgggtcctcgtcagcgggactgcatgtgttttctttcagtgaccctgagcgcggc
cggatctatgcggcggttgatcgcgttgaggggcccggcgctcttgactggaccatcatc
tcggcggtgccagccgcggatttcctgaggcctgtctatcgtgcagcctatctctcgatt
ggcgttggcgctgtcatcgtcggcgtcttcgtcctcctcggactagggctggttggacgc
accttacggccgctgactgccctgacccaggcagcgcacgcgatcgcaaagggggactgg
cgagacgtgcccgaactgcgccggaacgatgaagtcggcctgcttgcccaggcgttcact
ctcatgacgtcccgtctcaaggagacattggagggcctgcggcgaagcgaagccaatttc
gcagaagctcaacgcgttgcccatgttggctattgggagcgtgatctcagcaccgactgt
ctcacttggtcggacgagacataccgcatcttcgggctgacaccgcgcgcgaccgcggtc
gtcagtcttgccgaagcggttgagcggatacatccggaagaccggtcgttctggagccag
gccgcggccaaggcagtgcgtggcgaatctcggtacgacttggagtaccgaatcgtgagg
cctaccggcgaggtgcgcatcgtccacagccagggcgatctgacaagagaggcgtcgggc
cggccgcgcagcatgtttggcacaatccaggacattaccgaacgcaagcgggtggaaggg
gcactgcgagacagcgaggagcagtggagagccgtattcgagaacaatccgacgatgtac
ttcatggtggacgcgactggcaccatcgtgtcggtcaatccctttggggcggagcagctc
ggctacacggtcgacgaactgatcgaccgtcccgtacaggacatctttcacgaggcggat
cgcgacgccgtccagaggcatgcggccacctgtctcgaacatctcggccgcgccatgagc
tgggagctgcgcaagtttcgcaaggacggctcgatgctctgggttcgcgagacggcaaga
gcgatggtggtcaagaagcgacccgtcatcctgatcgtgtgcgaggacatcaccgagcgc
aagcgcgccgaagaggctgcccgaaggagtgaagaggagcttcgcgaggtcatcgagaca
gttccggcgatggtgtggaccgccctgcccgacggccgtgtcgacttcatcaatcggcgt
tggcaggaattcacaggcttgtccctggagggatcgtttgcggagaactggaagcccgaa
tcccggtttcacccagacgaccttgagcagtacatgtcgaagtggcgtatgtccttggcc
acgggccgccccttcgaggccgaggtgcgtatctgtcgtgcgtccgacggcgaatatcgc
tggtggttcgaaagtgccgtaccgctccgggacgagcacggagacattctcaaatggtat
ggatttctcgtcgacattgaagaccgaaagcgggccgaggaggcgctgcagaaggcgcag
gcggagctcgcgcatgtcacacgcgtgacgacgatgggcgcgctgacctcctccattgcc
cacgaggtcaaccagccgctggccgccgtggtgaccaatgcgaacgccgccctgcgctgg
ctcgcgacccagccccccaacctcgacgaagcccgcgagacgctggggcgtatcgtccgg
gacggccatcgggccggcgaggtgatcggccgggtgcgcgcgctcctcaagaagacagcc
agcgtcacggcgcaggtggacctgaacggcctcatcgaagagtcggtagtcctcgttcat
gaggaggtgcgccgtcagcgcgtcttgctgcgaaccgaactggcgcacgagctcccgcct
gttgcaggcgaccgggtccagttgcagcaggtcattttgaacctggtgatgaacggtatc
gaatctatgaagaaggtggcggaccggccacgcgagttgctgatcaggtcccgagccgac
acatccggcgccgtgctggtcgaagtacaggacaccggcgtcgggttggagccgcagagc
ctggagcaggtgttcgaggcgttttatacgacgaaagcggagggtctgggcatgggcttg
gccatctgccgttcgatcatcgaggcgcacggggggcggctatgggccggggcgaacgag
ccttggggcgctgtatttcagttcgccctgccttcagacccggacgagagcgcttgtaga
gggcagcgcgtttaa
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