Sinorhizobium fredii USDA 257: USDA257_c15110
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Entry
USDA257_c15110 CDS
T02188
Symbol
gcl
Name
(GenBank) glyoxylate carboligase Gcl
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00630
Glyoxylate and dicarboxylate metabolism
sfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
USDA257_c15110 (gcl)
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
USDA257_c15110 (gcl)
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Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
AFL50101
UniProt:
I3X2J5
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Position
complement(1598745..1600529)
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AA seq
594 aa
AA seq
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MAKMRAVDAAVHVLEKEGIDCAFGVPGAAINPLYSAVRARGSIRHILARHVEGASHMAEG
YTRAKHGNIGVCIGTSGPAGTDMITGLYSASADSIPILCITGQAPRARLDKEDFQAIDIA
AIAGPVTKWAVTVMEPALVPFVFQKAFHLMRSGRPGPVLIDLPVDVQMAEIEFDPETYEP
LAPYKPAASRAQAEKAIAMLNAAERPLIVAGGGIINADASDLLTEFAEITGVPVIPTLMG
WGTIPDDHPLMAGMCGLQTSHRYGNATLLASDFVFGIGNRWANRHTGNVPTYTEGRKFIH
VDIEPTQIGRVFAPDFGIVSDAGAALKLFLDVATEWKTAGKLRDWSAWAEECRERKRTML
RKTHFDQTPLKPQRVYEEMNRAFGRDTCFVSTIGLSQIAGAQFLHVYRPRNWINCGQAGP
LGWTLPAALGVRAADPNRPIVALSGDYDFQFLIEELAVGAQHKLPYLHVVVNNSYLGLIR
QAQRGFDMDFEVSLAFDNINASGDAEKSYGVDHVAVAEGLGCKAIRVRSPNEFADAFERA
QALMEEHQVPVVLEFILERVTNIAMGADINAVVEFEELAARGEDAPTAIAALLD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgcgtgctgtcgatgcagcggttcatgttctggaaaaggaggggatcgat
tgcgccttcggcgttccgggggcggcgatcaatccgctctattcggcggtgagagcccgc
ggctcgatccgccatattcttgcccgccacgttgaaggcgcctcgcacatggccgagggt
tacacccgggcgaagcacggcaatatcggcgtctgcatcggcacgtcagggccagccggc
accgacatgattaccggcctctactcggcctcggcagactcgatcccgatcctctgcatc
accggccaggcgccgcgcgcccgcctcgacaaggaggatttccaggcgatcgacatcgcc
gcgatcgcagggccggtcacgaaatgggcggtcactgtcatggagccggcgctggttcct
ttcgttttccagaaggcgttccatctgatgcgctcgggccggcccgggccggtgctcatc
gatctgccggtcgacgtccaaatggccgagatcgagttcgatccggagacctacgagccg
ctcgcgccctacaagcccgccgcgagccgagcccaggccgaaaaggcgatcgccatgctg
aacgcggcggaacggccgctgatcgttgccggcggcggtatcatcaatgcggacgcgtcg
gacctgctcaccgagttcgccgagatcaccggcgtcccggtcatcccgaccctgatgggc
tggggaactatccccgacgaccacccgctgatggctggcatgtgcggcctgcagacctcg
caccgctacggcaatgcgacgctgcttgcttccgacttcgtcttcggcatcggcaaccgt
tgggccaaccgccacaccggtaacgtcccgacctatacggaggggcgcaagttcatccat
gtcgatatcgagccgacgcagatcggccgcgtcttcgcgccggatttcggcatcgtctcg
gatgcgggggccgcactcaagctcttcctcgacgtcgcgaccgaatggaagaccgccggg
aagctgcgcgattggtcggcctgggcggaggaatgccgcgagcgcaagcgcaccatgctg
cgcaagacccacttcgaccagacgccgctcaaaccgcagcgcgtctacgaggagatgaac
agggccttcggccgcgacacctgcttcgtttcgaccatcggcctcagccagatcgccggc
gcgcagttccttcacgtctacaggccgcgcaactggatcaattgcggccaggccggtccg
ctcggctggaccctgccggcagcgctcggcgtacgcgctgccgatcccaaccggccgatt
gtcgcgctttccggcgattacgacttccagttcctgatcgaggaactcgccgtcggggcg
cagcacaagctcccttacctgcatgtcgtcgtcaacaattcctacctcggcctgatccgc
caggcccagcgcggcttcgacatggatttcgaggtgagcctcgccttcgacaacatcaat
gcgagcggcgacgcggaaaagagttacggcgtcgatcacgtcgccgtcgcggagggcctc
ggctgcaaggctatccgggtccgcagccccaatgagttcgccgatgccttcgaacgggcg
caggctctgatggaggaacatcaggtgccggtcgtcctcgaattcatcctcgagcgggtc
accaacatcgccatgggcgccgacatcaacgccgtcgtcgagttcgaggagcttgccgcg
cgcggcgaggacgcgccgaccgcaatcgccgccctgctcgactga
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