Shigella flexneri 2002017 (serotype Fxv): SFxv_4613
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Entry
SFxv_4613 CDS
T01883
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe03030
DNA replication
sfe03430
Mismatch repair
sfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SFxv_4613 (holC)
03430 Mismatch repair
SFxv_4613 (holC)
03440 Homologous recombination
SFxv_4613 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfe03032
]
SFxv_4613 (holC)
03400 DNA repair and recombination proteins [BR:
sfe03400
]
SFxv_4613 (holC)
Enzymes [BR:
sfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SFxv_4613 (holC)
DNA replication proteins [BR:
sfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SFxv_4613 (holC)
DNA repair and recombination proteins [BR:
sfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SFxv_4613 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ADA76526
UniProt:
D2AE48
LinkDB
All DBs
Position
4446963..4447445
Genome browser
AA seq
160 aa
AA seq
DB search
MQQYLNPPQEAPYMKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEK
QAYRLDEALWARPAESFVPHNLAGEGPRGSAPVEIAWPQKRSSSPRDILISLRTSFADFA
TAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatatttaaatccaccacaagaagccccatatatgaaaaacgcaacgttctac
cttctggacaatgacaccaccgtcgatggcttaagcgccgttgagcaactggtgtgtgaa
attgccgcagaacgttggcgcagcggtaagcgcgtactcatcgcctgtgaagatgaaaag
caggcttaccggctggatgaagccctgtgggcgcgtccggcagaaagctttgttccgcat
aatttagcgggagaaggaccgcgcggcagtgcgccggtggagatcgcctggccgcaaaaa
cgcagcagcagcccgcgcgatatattgattagtctgcgaacaagctttgcagattttgcc
accgctttcacagaagtggtagacttcgttccttatgaagattctctgaaacaactggcg
cgcgaacgctataaagcctaccgcgtggctggtttcaacctgaatacggcaacctggaaa
taa
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