Streptomyces ferrugineus: IM697_12770
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Entry
IM697_12770 CDS
T07428
Name
(GenBank) pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu00040
Pentose and glucuronate interconversions
sfeu01100
Metabolic pathways
sfeu02020
Two-component system
sfeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IM697_12770
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM697_12770
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IM697_12770
Enzymes [BR:
sfeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
IM697_12770
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IM697_12770
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GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
QOV39177
UniProt:
A0A7M2SS45
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Position
2802597..2804582
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AA seq
661 aa
AA seq
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MTHLNSKRLPGSGRTVAAVMGLVAALGLGSIGEAQGATPASPTMTTATPWTDRAHGFASL
DGGTTGGAGGKVVTVTDQASLARYAAAEEPYIIRVAGSIEVAPFGSDIVVGSDKTIVGVG
DTGEIVHGELHLNPGTSNVIIRNLTIRDSYVEGDWDGKTNDFDAIQMDTVDHVWIDHNRF
THMGDGLLDIRKDSQYITVSHNQFTHHNKALGIGWTSNALTQITIDHNWFQGTKQRNPSA
DNCAYAHLYNNYFTDQVRDDDPVWTYGSWARGRTKMVLENSYFDGVRHPYQADATAELVE
RGSILKNTTGRHDEWGDAFDPREFYRYRLDPAAAVPALVSRFSGPQKRLGDSVTLRVPGD
YPTVQAAVDAVPRGNASTVVIAVAPGTYREKVHIPSNKPNIVLQGTGQDRSDTVIVYDTP
AEYGGSSGSATVRIDANDVTARNLTFSNDFDEAAHELKGEQALAMKTNGDRIVFENTGFL
GNQDTLMTNSPSLTTVSRVYIRDSYIEGDVDFIYGRATTVIERSVIRALSRGSTTNNGYI
TAASTWKDNPYGFLITDSRIVSDAPDGSFHLGRPWHPGGDPDAIAQVLIRNTELPAAIKA
SPWTDMSGFSWKDARLTEYRNYGPGAAVTADRPQMSDEEARTHTVADYLQGTDNWAPYAR
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacctcaatagcaagcgcttgccgggatccggtagaaccgtggccgccgtcatg
ggcctggtggccgccctgggcctcgggtcgatcggcgaggcacagggcgccaccccggcg
tcgcccaccatgacgacggccacgccgtggaccgaccgggcccacggcttcgcctccctc
gacggcggcaccaccggcggggccggcggcaaggtcgtcaccgtcaccgaccaggcctca
ctggccaggtacgcggcggccgaggagccgtacatcatccgcgtggccggatcgatcgag
gtggcgcccttcggctcggacatcgtcgtcgggtcggacaagaccatcgtcggcgtcggc
gacaccggggagatcgtccacggcgagctgcacctcaacccgggcaccagcaacgtcatc
atccgcaacctgacgatccgcgactcctacgtcgagggcgactgggacggcaagaccaac
gacttcgacgcgatccagatggacaccgtcgaccacgtctggatcgaccacaaccgcttc
acgcacatgggcgacgggctgctcgacatccgcaaggacagccagtacatcaccgtctcc
cacaaccagttcacccaccacaacaaggcgctggggataggctggacgtccaacgcgctg
acgcagatcaccatcgaccacaactggttccagggcaccaagcagcgcaacccgtcggcc
gacaactgtgcctacgcccacctgtacaacaactacttcaccgaccaggtgcgcgacgac
gacccggtgtggacgtacggcagttgggcgcgcggccggaccaagatggtcctggagaac
agttatttcgacggcgtccggcatccctaccaggccgacgcgacggccgaactggtcgag
cgcgggtcgatcctgaagaacaccaccgggcggcacgacgagtggggcgacgccttcgac
ccccgggagttctaccggtaccggctggacccggccgccgccgtgccggcactcgtctcg
cggttctccggcccgcagaagcggctcggtgactctgtgacgctgcgcgtcccaggcgat
tacccgaccgtgcaggccgccgtggacgccgtgccccgcggcaacgcgagcacggtggtg
atcgcggtcgcgccgggcacctaccgggagaaggtccacatcccctcgaacaagccgaac
atcgtgctgcaggggactggacaagatcggtccgacaccgtcatcgtctacgacacgccc
gccgagtacggcggttcgagcggcagcgccaccgtgcggatcgacgcgaacgacgtcacc
gcgcgcaacctcaccttcagcaacgacttcgacgaggccgcacacgagctgaagggcgag
caggcgctcgcgatgaagacgaacggcgaccggatcgtcttcgagaacaccggcttcctg
ggcaaccaggacaccctgatgaccaacagcccctcgctgaccaccgtcagccgggtctac
atccgcgactcgtacatcgagggcgacgtcgacttcatctacggccgcgcgaccaccgtc
atcgagcgctccgtgatccgcgcgctcagccgcggctcgaccaccaacaacggctacatc
accgcggcctcgacctggaaggacaacccctacggcttcctgatcaccgactccaggatc
gtgagcgacgcgccggacggctccttccacctgggtcggccgtggcaccccggtggtgac
cccgacgcgatcgcccaggtgctgatccggaacaccgagctgccggccgcgatcaaggcc
tcgccctggaccgacatgagcgggttctcgtggaaggacgcgcggctcaccgaataccgg
aactacgggccgggggcggccgtcaccgcggaccggccgcagatgagcgacgaggaggcg
cggacccacaccgtcgccgactacctccagggcacggacaactgggcgccgtacgcccgt
cactga
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