Streptomyces microflavus: SFUL_3133
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Entry
SFUL_3133 CDS
T02650
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sfi
Streptomyces microflavus
Brite
KEGG Orthology (KO) [BR:
sfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfi03032
]
SFUL_3133
03400 DNA repair and recombination proteins [BR:
sfi03400
]
SFUL_3133
Enzymes [BR:
sfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SFUL_3133
DNA replication proteins [BR:
sfi03032
]
Prokaryotic type
DNA Topoisomerases
SFUL_3133
DNA repair and recombination proteins [BR:
sfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFUL_3133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGK78068
UniProt:
N0CWT4
LinkDB
All DBs
Position
complement(3559722..3562610)
Genome browser
AA seq
962 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDEYTGE
VRRLGVDVENDFQPIYVVNADKKAQVRKLKQLLAESDELFLATDEDREGEAIAWHLQEVL
KPKVPVHRMVFHEITKDAIRAAVANPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVM
PKLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGKFATGRTGDASDPSTLTARLSAVD
GRRIAQGRDFGPDGQLKAGSAQTLHLDEANARALAAALADTSFAVRSVESKPYRRSPYAP
FRTTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAISAARAQVTQLY
GANYLPEKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQ
MKDATGNSVTVKIGGRASDGRDAEFSASGKTITFHGFMKAYVEGADDPNAELDDRERRLP
QVAEGDALSAEEVTVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRISRGEAQSVPWLKRFYFGA
QPGDDTSDAGTASDAGNGDGDHLGGLKALVTDLGAIDAREISSFPVGNDIKLRVGRYGPY
IERGEKDAEGHQRADVPEDLAPDELTVELAEELLAKPSGDFELGADPVTGNQIIAKDGRY
GPYVTEVLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLADALKLMSLPRVVGEDAEGVEI
TAQNGRYGPYLKKGTDSRSLTSEDQLFDITLEEALAIYAQPKQRGRAAAKPPLKELGTDP
VSGAPVVVKDGRFGAYVTDGETNATLRTDDSVEDITPERGFELLAEKRAKGPAKKKTAKK
APAKKATAKKTAAKKTTATKTTAAKKTAAKKTTATKSTAAKKTATAKKTASASASASASS
ED
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggatatgtcgtcgaggcgagcgtc
gggcacatccgcgacctgccgaacggcgccgccgaggtgccggacgagtacaccggcgag
gtgcgccgtctcggcgtggatgtcgagaacgacttccagcccatctatgtcgtcaacgca
gacaagaaggcccaggtcaggaagctcaagcagctgctggccgagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaagccatcgcgtggcacctgcaggaagtgctc
aagcccaaggtcccggtccaccggatggtcttccacgagatcaccaaggacgcgatccgg
gccgccgtcgccaacccgcgcgagctcaaccagcgcatggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgaagctctcggcgggccgcgtccagtccgtcgccacccgcctcgtcgtcgagcgggag
cgcgagcgcatcgccttccgctccgccgagtactgggacctgaccggaaagttcgccacc
ggacgcaccggtgacgcctccgacccctcgaccctgaccgcccgcctcagcgcggtcgac
ggccgccggatcgcccagggccgcgacttcggccccgacgggcagctcaaggccggctcc
gcccagaccctgcacctcgacgaggcgaacgcccgcgccctggccgccgcgctcgccgac
acgtccttcgcggtccggtccgtcgagtcgaagccgtaccgacgttccccgtacgccccc
ttccggacgacgaccctccagcaggaggcgagccgcaagctgggcttcggggcgaaggcg
accatgcaggtggcgcagaagctgtacgagaacggcttcatcacctatatgcgtaccgac
tccacgaccctctcggacaccgcgatctccgcggcccgggcccaggtcacgcagttgtac
ggggcgaactacctgcccgagaagccgcgtacgtacgccgggaaggtcaagaacgcgcag
gaggcgcacgaggcgatccgcccctccggcgaccgcttccgcacccccgccgagaccggc
ctcaccggcgaccagttccggctctacgagctgatctggaagcggaccgtcgcctcccag
atgaaggacgcgaccggcaactccgtcaccgtcaagatcggcggccgggcgagcgacggc
cgggacgccgagttctccgcctccggcaagacgatcaccttccacggcttcatgaaggcg
tacgtcgaaggcgccgacgacccgaacgccgagctggacgaccgcgagcggcggctgccg
caggtcgccgagggcgacgcgctgtccgccgaagaggtcacggtcgacgggcacgccacc
aagcccccggcccgctacaccgaggcctcgctggtcaaggagctcgaagagcgcgagatc
ggccgcccgtcgacgtacgcgtcgatcatcgggaccatcctggaccgcggatacgtcttc
aagaagggcacggcgctcgtcccgtccttcctctccttcgctgtggtcaacctgctggag
aagcacttcggccggctcgtcgactacgacttcaccgcccgcatggaggacgacctcgac
cgcatctcgcggggcgaggcccagtccgtgccgtggctcaagcgcttctacttcggcgcc
cagcccggtgacgacacctccgacgccggtacggcctccgacgcgggcaacggcgacggc
gaccacctcggcggtctgaaggcactggtcaccgacctcggcgcgatcgacgcccgggag
atctcctccttccccgtcggcaacgacatcaagctccgtgtcggccgctacggcccgtac
atcgagcggggcgagaaggacgccgagggccaccagcgcgccgacgtgcccgaggacctg
gcacccgacgagctgaccgtcgagctcgccgaggagctgctggccaagcccagcggcgac
ttcgagctgggcgccgacccggtcaccggcaaccagatcatcgccaaggacgggcgctac
ggcccgtacgtcaccgaggtgctgcccgaggggacgccgaagaccggcaagaacgcggtg
aagccgcggaccgcctcgctcttcaagtccatgtccctggacacggtcaccctggccgac
gccctcaagctgatgtcgctgccgcgcgtcgtcggtgaggacgccgagggtgtcgagatc
accgcgcagaacggccgctacggcccgtatctgaagaagggcaccgactcccggtcgctg
acctccgaggaccagctcttcgacatcaccctcgaagaggccctcgcgatctacgcccag
cccaagcagcgcggccgggccgcggccaagccgccgctgaaggagctgggcaccgacccg
gtcagcggagcgccggtcgtggtgaaggatggccgcttcggcgcgtacgtcaccgacggc
gagaccaacgcgacgctgcggaccgacgacagcgtcgaggacatcacgccggagcgcggc
ttcgagctgctcgccgagaagcgcgccaagggacccgccaagaagaagacggcgaagaag
gccccggcgaagaaggcgacggccaagaagacggccgcgaagaagacaacggcgaccaag
accacggccgccaagaagaccgcggcgaagaagacgacggcaaccaagagcacggctgcc
aagaagacggcgacggcgaagaagacggcttctgcttcggcctccgcttcggcttcctcg
gaggactga
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