Streptomyces ficellus: EIZ62_07435
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Entry
EIZ62_07435 CDS
T06929
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sfic
Streptomyces ficellus
Pathway
sfic02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EIZ62_07435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfic03021
]
EIZ62_07435
Transcription machinery [BR:
sfic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIZ62_07435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
QGV78099
UniProt:
A0A6I6FHQ0
LinkDB
All DBs
Position
complement(1700841..1702385)
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AA seq
514 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRTRKSVAAKSPAKRTATKTVTAKSAVTKSVAAAAPAAQSEDV
PADEAGTPAKKAAAKKTAAKKTAVKKTAAKKTAAKKTTSKKDSDEVVEGEELLEDVAPGK
GEDEETEGENKGFVLSDEDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVELA
KRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRG
MLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVE
VINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSE
FGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGK
VYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaatgttctgcgcagcctcaatcag
atcctcgaggaagagggtgtgacgctgatggtcagtgcagcggagtcgccgaagcgcacc
cgcaagagcgtcgcagcgaagagcccggcgaagcgcaccgccaccaagaccgtcaccgcc
aagtcggccgtgacgaagtccgtcgccgccgcggctccggcggcccagagcgaggacgtg
ccggccgacgaggccggtacgcccgccaagaaggcggccgccaagaagaccgccgccaag
aagacggcggtgaagaagaccgccgcgaagaagaccgccgcgaagaagaccacgtccaag
aaggactccgacgaggtcgtcgagggcgaggagctgctcgaggacgtcgcgcccggcaag
ggtgaggacgaggagaccgagggcgagaacaagggcttcgtcctctccgacgaggacgag
gacgacgcgcccgcgcagcaggtcgccgtcgccggtgccaccgcggacccggtcaaggac
tacctgaagcagatcggcaaggtcccgctcctcaacgccgagcaggaggtcgagctcgcc
aagcgcatcgaggccggtctgttcgccgaggacaagctggcgaactccgacaagctggcg
ccgaagctcaagcgcgagctcgagatcatcgccgaggacggccgccgcgccaagaaccac
ctgctggaggccaacctccgtctcgtggtctccctggccaagcgctacaccggccgcggc
atgctcttcctggacctgatccaggagggcaacctgggtctgatccgcgcggtcgagaag
ttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcaggcg
atcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatggtcgag
gtcatcaacaagctcgcgcgcgtccagcgccagatgctccaggacctgggccgtgagccc
accccggaggagctggccaaggagctcgacatgacccccgagaaggtcatcgaggtccag
aagtacggccgcgagcccatctcgctgcacaccccgctcggcgaggacggcgacagcgag
ttcggtgacctcatcgaggactccgaggcggtcgtgccggccgacgcggtcagcttcacg
ctcctccaggagcagctgcactcggtcctcgacacgctctccgagcgtgaggccggcgtc
gtctccatgcgcttcggcctgaccgacggccagccgaagacgctcgacgagatcggcaag
gtctacggcgtgacccgtgagcggatccgccagatcgagtccaagaccatgtccaagctg
cgtcacccgtcgcgttcccaggtgctgcgcgactacctggactga
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