Streptomyces ficellus: EIZ62_08510
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Entry
EIZ62_08510 CDS
T06929
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sfic
Streptomyces ficellus
Pathway
sfic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EIZ62_08510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfic03400
]
EIZ62_08510
Enzymes [BR:
sfic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EIZ62_08510
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EIZ62_08510
DNA repair and recombination proteins [BR:
sfic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EIZ62_08510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
Zn_ribbon_recom
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QGV78283
UniProt:
A0A6I6F2T3
LinkDB
All DBs
Position
complement(1964145..1965020)
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVEVVRRGLERWVSGRTVSDVQVLHPRAVRRHLAGGPDFAARLTGHRFGVARRRG
KYLWLPLEDTDASVLGHLGMSGQLLVQPEAAADEKHLRIRIRFDDGLGTELRFVDQRTFG
GLSLHENTPDGLPLAIAHIARDPLDPEFDDTAFHTALRLRRTTVKRALLDQSLISGVGNI
YADEALWRARLHYDRPTASLTRPRSVELLGHVRDVMTAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRLTPPRTAS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaagtcgtacgacggggcctggagcgctgggtcagcggc
cggaccgtctccgacgtccaggtcctgcacccccgcgccgtccggcggcacctcgcgggc
ggccccgacttcgccgcccggctgacggggcaccgcttcggcgtcgcgcggcggcgcggc
aagtacctgtggctgccgctggaggacaccgacgcgtccgtgctcgggcacctcggcatg
agcgggcagctcctcgtacagccggaggccgcggcggacgagaagcacctgcggatccgc
atccgcttcgacgacgggctcgggaccgagctgcgcttcgtcgaccagcgcaccttcggc
gggctctcgctgcacgagaacacccccgacgggcttcccctggcgatcgcgcacatcgcg
cgcgaccccctggaccccgagttcgacgacaccgccttccacacggcgctgcgcctgcgc
cgtacgacggtcaaacgcgccctgctcgaccagtcgctgatcagcggtgtgggcaacatc
tacgcggacgaggcgctgtggcgcgcccgcctccactacgaccgccccactgcgagcctg
acccggccccgctccgtcgagctcctcggacacgtccgggacgtgatgacggccgcgctc
gcggtcggcggcaccagcttcgacagcctgtacgtcaacgtcaacggcgagtcgggctac
ttcgaccggtccctggacgcgtacggccgcgagggcgagccctgccgacgctgcggcacc
ccgatgcgccgccgcccctggatgaaccgctctagctacttctgcccccgctgccagcgc
ccaccccgcctgaccccgccccgcacggcgtcctag
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