Streptomyces ficellus: EIZ62_10600
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Entry
EIZ62_10600 CDS
T06929
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sfic
Streptomyces ficellus
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfic03021
]
EIZ62_10600
Transcription machinery [BR:
sfic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIZ62_10600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
HTH_10
HTH_3
HTH_AsnC-type
Sigma70_ECF
HTH_Crp_2
MarR
HTH_Tnp_ISL3
IF2_N
HTH_28
GerE
HTH_AraC
UBA_2
Motif
Other DBs
NCBI-ProteinID:
QGV78642
UniProt:
A0A6I6FF40
LinkDB
All DBs
Position
2464147..2465034
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AA seq
295 aa
AA seq
DB search
MRDEERGPRALSSIPEQQARPHPVDGLLDERADRMNQQQHNHHDPNDRSGARALFIELRT
LPDGSPERAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPDRG
VEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAELSQLHGRSPTVHELA
ERLGISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPL
LEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagacgaggagcgcggcccgcgggcactgagctcgatcccggaacagcaggcgcgg
ccgcacccggtggacggtcttttggatgagcgggcggaccggatgaaccagcagcagcac
aaccaccacgatccgaacgaccgcagtggcgcgagggctctcttcatcgagctgcgcacg
ctgccggacggctcgcccgagcgggccgagctgcgcaaccggctcgtgcggatgcacctg
ccgctggtggagcacctggcgcgccgcttccgcaaccgcggcgagccgctggacgacctg
acgcaggtcgccaccatcggcctgatcaagtccgtggaccgcttcgaccccgaccggggc
gtggagttctcgacgtacgcgaccccgacggtcgtcggcgagatcaagcggcacttccgc
gacaagggctgggcggtgcgggtgccccgccggctccaggagctgcgcctgtcgctgacg
acggcgaccgccgagctgtcgcagctgcacggccgctccccgaccgtgcacgagctggcc
gagcgcctgggcatctcggaggaggaggtcctggagggcctggagtccgcgaacgcgtac
tcgacgctctcgctggacgtgccggacacggacgacgagtccccggcggtggccgacacc
ctgggcgcggaggacgaggcgctggagggcgtcgagtaccgggagtccctcaagccgctg
ctggaggacctgccgccgcgcgagaagcgcatcctgctgctgcggttcttcggcaacatg
acccagtcgcagatcgcccaggaggtcggcatctcgcagatgcacgtctcccggctgctg
gcccgtacgctcgcgcagctgcgcgagaagctcctcgtggaggagtga
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